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SCNpilot_cont_1000_bf_scaffold_155_curated

Search features with annotation key words

Displaying items 31-60 of 269 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_155_curated_31
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27182..28825
DNA (1644bp) protein (548aa)
UPI0003D04483 related cluster n=1 Tax=unknown RepID=UPI0003D04483
Putative peptide transporter subunit: periplasmic-binding component of ABC superfamily {ECO:0000313|EMBL:CDX52334.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
ABC-type dipeptide transport system, periplasmic component
SCNpilot_cont_1000_bf_scaffold_155_curated_32
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28815..29759
DNA (945bp) protein (315aa)
Putative acetamidase/formamidase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KFI5_MESAW
Acetamidase/Formamidase {ECO:0000313|EMBL:CDX23027.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
putative acetamidase/formamidase
SCNpilot_cont_1000_bf_scaffold_155_curated_33
Mesorhizobium sp. L2C054A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29756..31561
DNA (1806bp) protein (602aa)
UPI0003D04BBC related cluster n=1 Tax=unknown RepID=UPI0003D04BBC
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESZ44336.1}; TaxID=1287100 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C054A000.;"
ABC transporter; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_1000_bf_scaffold_155_curated_34
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31582..32430)
DNA (849bp) protein (283aa)
UPI0003CED118 related cluster n=1 Tax=unknown RepID=UPI0003CED118
Patatin {ECO:0000313|EMBL:ESY66499.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein; K07001 NTE family protein rbh
SCNpilot_cont_1000_bf_scaffold_155_curated_35
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32427..33812)
DNA (1386bp) protein (462aa)
UPI0003CEF6A7 related cluster n=2 Tax=unknown RepID=UPI0003CEF6A7
putative Zn-dependent peptidase
Putative Zn-dependent peptidase {ECO:0000313|EMBL:AGB46974.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_1000_bf_scaffold_155_curated_36
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33815..35185)
DNA (1371bp) protein (457aa)
protease; K01422 [EC:3.4.99.-] rbh
zinc protease n=1 Tax=Rhizobium loti RepID=UPI00036EF9DF
Insulinase family protein {ECO:0000313|EMBL:AID29401.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_1000_bf_scaffold_155_curated_37
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35320..35877)
DNA (558bp) protein (186aa)
Methyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YC90_9RHIZ
Methyltransferase {ECO:0000313|EMBL:EHH10655.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
RNA methyltransferase, RsmD family
SCNpilot_cont_1000_bf_scaffold_155_curated_38
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35858..37885)
DNA (2028bp) protein (676aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
RNA-binding S4 domain-containing protein; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Pseudouridine synthase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YC89_9RHIZ
SCNpilot_cont_1000_bf_scaffold_155_curated_39
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38203..38637
DNA (435bp) protein (145aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
tRNA-specific adenosine deaminase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FA39_9RHIZ
nitrogen fixation protein gene
SCNpilot_cont_1000_bf_scaffold_155_curated_40
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38748..39428)
DNA (681bp) protein (227aa)
UPI0003D0092A related cluster n=1 Tax=unknown RepID=UPI0003D0092A
Uncharacterized protein {ECO:0000313|EMBL:ESZ23032.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_155_curated_41
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39617..42592)
DNA (2976bp) protein (992aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] rbh
isoleucyl-tRNA synthase n=1 Tax=Rhizobium loti RepID=UPI00037C8888
SCNpilot_cont_1000_bf_scaffold_155_curated_42
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42967..43764)
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YC85_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX22970.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
MltA-interacting MipA family protein
SCNpilot_cont_1000_bf_scaffold_155_curated_43
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43936..44937)
DNA (1002bp) protein (334aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Rhizobium sp. CF080 RepID=J2JNB5_9RHIZ
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EUB98417.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_155_curated_44
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44989..45807)
DNA (819bp) protein (273aa)
AraC family transcriptional regulator n=1 Tax=Rhizobium radiobacter RepID=UPI00036EFC21
Short-chain dehydrogenase {ECO:0000313|EMBL:KKC34025.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_1000_bf_scaffold_155_curated_45
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46012..48450
DNA (2439bp) protein (813aa)
dimethylglycine dehydrogenase; K00315 dimethylglycine dehydrogenase [EC:1.5.8.4] rbh
Dimethylglycine dehydrogenase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98ID7_RHILO
Dimethylglycine dehydrogenase {ECO:0000313|EMBL:CDX28434.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
SCNpilot_cont_1000_bf_scaffold_155_curated_46
Mesorhizobium sp. LNJC399B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48656..49210
DNA (555bp) protein (185aa)
HdeD protein n=2 Tax=Mesorhizobium RepID=V7F0Q9_9RHIZ
HdeD protein {ECO:0000313|EMBL:ESY03466.1}; TaxID=1287277 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC399B00.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_155_curated_47
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49215..50198)
DNA (984bp) protein (328aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
Bifunctional riboflavin kinase/FMN adenylyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YC75_9RHIZ
SCNpilot_cont_1000_bf_scaffold_155_curated_48
Brucella sp. 83/13, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(50406..51023)
DNA (618bp) protein (206aa)
Lipase:twin-arginine translocation pathway signal n=2 Tax=Brucella RepID=E0DUE8_9RHIZ
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEZ33849.1}; TaxID=520449 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. 83/13.;"
SCNpilot_cont_1000_bf_scaffold_155_curated_49
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51025..51618)
DNA (594bp) protein (198aa)
Isoprenylcysteine carboxyl methyltransferase n=3 Tax=Ochrobactrum RepID=C4WLN1_9RHIZ
Isoprenylcysteine carboxyl methyltransferase {ECO:0000313|EMBL:EEQ93013.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
isoprenylcysteine carboxyl methyltransferase
SCNpilot_cont_1000_bf_scaffold_155_curated_50
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51615..52787)
DNA (1173bp) protein (391aa)
Lipase n=1 Tax=Ochrobactrum sp. EGD-AQ16 RepID=U1YV15_9RHIZ
Lipase {ECO:0000313|EMBL:ERI15917.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_155_curated_51
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52823..53683)
DNA (861bp) protein (287aa)
UPI0003CEC398 related cluster n=1 Tax=unknown RepID=UPI0003CEC398
HAD family hydrolase {ECO:0000313|EMBL:ESY65130.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
HAD-superfamily hydrolase
SCNpilot_cont_1000_bf_scaffold_155_curated_52
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53909..54541
DNA (633bp) protein (211aa)
UPI0003CE1B14 related cluster n=1 Tax=unknown RepID=UPI0003CE1B14
Lysine transporter LysE {ECO:0000313|EMBL:ESW92492.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
putative threonine efflux protein
SCNpilot_cont_1000_bf_scaffold_155_curated_53
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(54560..55384)
DNA (825bp) protein (275aa)
cytochrome C oxidase subunit I n=1 Tax=Rhizobium loti RepID=UPI00036247B1
Uncharacterized protein {ECO:0000313|EMBL:AID29386.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_155_curated_54
unknown

Not on your lists

comp(55414..55509)
DNA (96bp) protein (32aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_155_curated_55
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(55533..55931)
DNA (399bp) protein (133aa)
glyoxalase n=1 Tax=Hoeflea sp. 108 RepID=UPI00037D22EE
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:EJC77837.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_1000_bf_scaffold_155_curated_56
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

56031..56546
DNA (516bp) protein (172aa)
serine protease n=1 Tax=Rhizobium loti RepID=UPI000368C1E0
hypothetical protein
Uncharacterized protein with SCP/PR1 domains {ECO:0000313|EMBL:ETA72454.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
SCNpilot_cont_1000_bf_scaffold_155_curated_57
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56728..57711)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036E9B66
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:CDX27998.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
oxidoreductase, 2OG-Fe(II) oxygenase family
SCNpilot_cont_1000_bf_scaffold_155_curated_58
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57799..59331)
DNA (1533bp) protein (511aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TIK9_MESCW
EmrB/QacA subfamily drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ADV13711.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_1000_bf_scaffold_155_curated_59
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59713..60882)
DNA (1170bp) protein (390aa)
Secretion protein HlyD family protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YC63_9RHIZ
Secretion protein HlyD family protein {ECO:0000313|EMBL:EHH10737.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
secretion protein HlyD family protein; K03543 multidrug resistance protein A
SCNpilot_cont_1000_bf_scaffold_155_curated_60
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(60879..61358)
DNA (480bp) protein (160aa)
MarR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FN09_9RHIZ
MarR family transcriptional regulator {ECO:0000313|EMBL:ESX81769.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
MarR family transcriptional regulator
Displaying items 31-60 of 269 in total

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