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SCNpilot_cont_1000_bf_scaffold_155_curated

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Displaying items 91-120 of 269 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_155_curated_91
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89665..90900
DNA (1236bp) protein (412aa)
FAD dependent oxidoreductase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y3U1_MESOW
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:AEH89560.1}; Flags: Precursor;; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_1000_bf_scaffold_155_curated_92
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90934..91596)
DNA (663bp) protein (221aa)
Mlr8156 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q983V5_RHILO
hypothetical protein rbh
Mlr8156 protein {ECO:0000313|EMBL:BAB53775.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_bf_scaffold_155_curated_93
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(91790..94987)
DNA (3198bp) protein (1066aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00038068E0
acriflavin resistance protein; K07789 RND superfamily, multidrug transport protein MdtC
Acriflavin resistance protein {ECO:0000313|EMBL:ABS66844.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_1000_bf_scaffold_155_curated_94
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94991..96109)
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00037EE5E8
RND family efflux transporter MFP subunit; K07799 putative multidrug efflux transporter MdtA
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ACB94811.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_1000_bf_scaffold_155_curated_95
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96304..97317
DNA (1014bp) protein (338aa)
ABC transporter, substrate-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q984L7_RHILO
ABC transporter substrate-binding protein; K02051 NitT/TauT family transport system substrate-binding protein rbh
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component {ECO:0000313|EMBL:ETA72277.1}; Flags: Precursor;; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
SCNpilot_cont_1000_bf_scaffold_155_curated_96
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97424..98233
DNA (810bp) protein (270aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q984L6_RHILO
Uncharacterized protein {ECO:0000313|EMBL:CDX19479.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein rbh
SCNpilot_cont_1000_bf_scaffold_155_curated_97
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

98245..99123
DNA (879bp) protein (293aa)
ABC transporter permease n=1 Tax=Rhizobium loti RepID=UPI000361A005
ABC transporter, permease {ECO:0000313|EMBL:CDX19480.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
ABC transporter permease; K02050 NitT/TauT family transport system permease protein rbh
SCNpilot_cont_1000_bf_scaffold_155_curated_98
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(99130..100515)
DNA (1386bp) protein (462aa)
integral membrane sensor signal transduction histidine kinase; K07649 two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFI7_XANP2
SCNpilot_cont_1000_bf_scaffold_155_curated_99
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100505..101179)
DNA (675bp) protein (225aa)
PREDICTED: probable transcriptional regulator ycf27-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C134C0
two-component response regulator; K07774 two-component system, OmpR family, response regulator TctD
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:ETA72281.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
SCNpilot_cont_1000_bf_scaffold_155_curated_100
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101355..102158)
DNA (804bp) protein (268aa)
ABC transporter related protein n=3 Tax=Mesorhizobium RepID=F7Y4T4_MESOW
Putative amino acid transport protein, ATP-binding protein {ECO:0000313|EMBL:CDX39815.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
ABC-type polar amino acid transport system, ATPase component
SCNpilot_cont_1000_bf_scaffold_155_curated_101
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(102207..103364)
DNA (1158bp) protein (386aa)
UPI0003CE1EFA related cluster n=1 Tax=unknown RepID=UPI0003CE1EFA
Amino acid ABC transporter permease {ECO:0000313|EMBL:ESY95568.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
amino acid ABC transporter permease; K09971 general L-amino acid transport system permease protein rbh
SCNpilot_cont_1000_bf_scaffold_155_curated_102
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103369..104556)
DNA (1188bp) protein (396aa)
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KQR8_MESAW
Amino-acid transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDX27381.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
SCNpilot_cont_1000_bf_scaffold_155_curated_103
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104616..105644)
DNA (1029bp) protein (343aa)
Amino acid ABC transporter substrate-binding protein n=4 Tax=Mesorhizobium RepID=V7GBV3_9RHIZ
Amino-acid transporter subunit periplasmic-binding component of ABC superfamily {ECO:0000313|EMBL:CDX44849.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
amnino acid ABC transporter substrate-binding protein; K09969 general L-amino acid transport system substrate-binding protein rbh
SCNpilot_cont_1000_bf_scaffold_155_curated_104
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105931..106794)
DNA (864bp) protein (288aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y550_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH13101.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_155_curated_105
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(106799..107434)
DNA (636bp) protein (212aa)
UPI0003CE4B79 related cluster n=1 Tax=unknown RepID=UPI0003CE4B79
Uncharacterized protein {ECO:0000313|EMBL:ESY66594.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_155_curated_106
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107740..108909
DNA (1170bp) protein (390aa)
Cystathionine beta-lyase, PLP-dependent {ECO:0000313|EMBL:CCV06112.1}; EC=4.4.1.8 {ECO:0000313|EMBL:CCV06112.1};; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
cystathionine beta-lyase (EC:4.4.1.8); K01760 cystathionine beta-lyase [EC:4.4.1.8]
Cystathionine beta-lyase, PLP-dependent n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EP40_9RHIZ
SCNpilot_cont_1000_bf_scaffold_155_curated_107
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109122..110210
DNA (1089bp) protein (363aa)
CBS domain containing membrane protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y553_9RHIZ
CBS domain containing membrane protein {ECO:0000313|EMBL:EHH13104.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
HPP family protein; K07168 CBS domain-containing membrane protein
SCNpilot_cont_1000_bf_scaffold_155_curated_108
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110273..110920
DNA (648bp) protein (216aa)
Branched-chain amino acid transport system ATP-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HPL8_9BRAD
Branched-chain amino acid transport system ATP-binding protein {ECO:0000313|EMBL:ERF86738.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
type 12 methyltransferase
SCNpilot_cont_1000_bf_scaffold_155_curated_109
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110868..112169)
DNA (1302bp) protein (434aa)
GGDEF domain protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JGY8_OLICO
Diguanylate cyclase {ECO:0000313|EMBL:EZQ16176.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
GGDEF domain-containing protein
SCNpilot_cont_1000_bf_scaffold_155_curated_110
Mesorhizobium sp. LSHC422A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112503..113180
DNA (678bp) protein (226aa)
UPI0003CEAFD7 related cluster n=1 Tax=unknown RepID=UPI0003CEAFD7
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1287294 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC422A00.;"
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_1000_bf_scaffold_155_curated_111
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113296..113820
DNA (525bp) protein (175aa)
UPI0003CDD328 related cluster n=1 Tax=unknown RepID=UPI0003CDD328
Membrane protein {ECO:0000313|EMBL:ESW82983.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein; K08995 putative membrane protein
SCNpilot_cont_1000_bf_scaffold_155_curated_112
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113829..114137
DNA (309bp) protein (103aa)
UPI0003CFFA50 related cluster n=1 Tax=unknown RepID=UPI0003CFFA50
Amicyanin {ECO:0000313|EMBL:ESZ20619.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
blue (type 1) copper domain-containing protein
SCNpilot_cont_1000_bf_scaffold_155_curated_trna_2
unknown

Not on your lists

comp(114231..114304)
DNA (74bp)
transferRNA
SCNpilot_cont_1000_bf_scaffold_155_curated_113
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114347..114778)
DNA (432bp) protein (144aa)
ETC complex I subunit conserved region n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y4V3_MESOW
ETC complex I subunit conserved region
ETC complex I subunit conserved region {ECO:0000313|EMBL:AGB47050.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_1000_bf_scaffold_155_curated_trna_1
unknown

Not on your lists

114856..114929
DNA (74bp)
transferRNA
SCNpilot_cont_1000_bf_scaffold_155_curated_114
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115045..116148
DNA (1104bp) protein (368aa)
Citrate transporter n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TJL4_MESCW
citrate transporter
Citrate transporter {ECO:0000313|EMBL:ADV13776.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_1000_bf_scaffold_155_curated_115
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116173..116985)
DNA (813bp) protein (271aa)
enoyl-CoA hydratase n=1 Tax=Rhizobium meliloti RepID=UPI0003643243
Enoyl-CoA hydratase {ECO:0000313|EMBL:KJS42977.1}; TaxID=1629709 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41.;"
Enoyl-CoA hydratase/isomerase
SCNpilot_cont_1000_bf_scaffold_155_curated_116
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116975..119053)
DNA (2079bp) protein (693aa)
CoA-binding protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MDK8_9BURK
CoA-binding protein
CoA-binding protein {ECO:0000313|EMBL:AET90776.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
SCNpilot_cont_1000_bf_scaffold_155_curated_117
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(119053..121062)
DNA (2010bp) protein (670aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00030E71CA
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ACA18234.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_1000_bf_scaffold_155_curated_118
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121239..122162
DNA (924bp) protein (308aa)
Transcriptional regulatory protein n=1 Tax=Roseovarius sp. 217 RepID=A3W3D4_9RHOB
Transcriptional regulatory protein {ECO:0000313|EMBL:EAQ24723.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 217.;"
transcriptional regulator
Displaying items 91-120 of 269 in total

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