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SCNpilot_cont_1000_bf_scaffold_155_curated_99

Organism: scnpilot_dereplicated_Mesorhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(100505..101179)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: probable transcriptional regulator ycf27-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C134C0 similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 217.0
  • Bit_score: 337
  • Evalue 9.90e-90
two-component response regulator; K07774 two-component system, OmpR family, response regulator TctD similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 222.0
  • Bit_score: 259
  • Evalue 1.40e-66
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:ETA72281.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 222.0
  • Bit_score: 259
  • Evalue 6.20e-66

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGCGCATCCTGCTTGCCGAGGACAATCGCGAATTGTCGACCTGGGTGGCGCGCCTGCTTCGGCGCGACAACTACGTCATCGACTGCGTCTATCGCGGCGACGATGCCGACGTCGCGCTTGCCAGCCAGGACTATGCGCTGGTGATCCTGGACCTCGCGCTGCCGCATCTCGACGGCATCGAAGTGCTGCGCCGGCTGCGTGCCCGCGGCAGCACCACGCCTGTCATCATCCTCACCGCCAATGATGCCGTATCGAGCCGTGTGCGCGGACTGGACAGCGGCGCCGACGACTATCTGGTGAAACCCTTCAACGTCGATGAGTTCGAGGCGCGCGTGCGCGCGCAGCTCAGGCGCGGCCGGGGCAGCTTCGACCCTTCGGTGCGCTTCGGCAATCTCGCCTTCGACACTCAGGCGCGAACCTTCACGCTTAGCGAAGCGCCGCTCCACCTGACCGCGCGCGAGCATGCGGTGCTGGAGACACTGATCCTGCGGGCCGGGCGGCCGGTGCAGAAGACCGTGCTTGCCGAAAATATCTTCGGCTTCGACGACGAGACGAACCCGAATGCGCTGGAGATCTGCATCCACCGCGTCAGGAAGAAGCTCGAAGGCAGCGGCATGGCGATAACCACGCTGCGCGGCCTCGGCTACGCGCTCAAGATCGACGATGGCCACTAG
PROTEIN sequence
Length: 225
MRILLAEDNRELSTWVARLLRRDNYVIDCVYRGDDADVALASQDYALVILDLALPHLDGIEVLRRLRARGSTTPVIILTANDAVSSRVRGLDSGADDYLVKPFNVDEFEARVRAQLRRGRGSFDPSVRFGNLAFDTQARTFTLSEAPLHLTAREHAVLETLILRAGRPVQKTVLAENIFGFDDETNPNALEICIHRVRKKLEGSGMAITTLRGLGYALKIDDGH*