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SCNpilot_cont_1000_bf_scaffold_49_curated_23

Organism: scnpilot_dereplicated_Mesorhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(27063..27719)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=1 Tax=Rhizobium loti RepID=UPI0003663D17 similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 218.0
  • Bit_score: 357
  • Evalue 1.20e-95
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 218.0
  • Bit_score: 356
  • Evalue 2.10e-95
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 218.0
  • Bit_score: 355
  • Evalue 1.40e-95
  • rbh

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Taxonomy

Mesorhizobium huakuii → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGAATGCATCGGGACATCATTTCATTGCCGACAAAGCCTTTCTCGCCTTCGAAGTTGCGAAGACCGGACTGGCGGTGACCATGCGCAAGGACGAAGAAAGCCCGTCGGCGCCAGAAGCGAGCCGTCTGCTGGCGGCGGTCGCGGCCGATCGCGATCGCGCCGCCTTCGCCGTGCTGTTCGGTTTCTACGCTCCGCGCGTGAAAGCCTTCCTGAGGCGCTCGGGCATGACAGCGTCCGCCGCAGAGGACGTCGCGCAGGAGACGATGCTCATCGTTTGGAAGAAGGCGTCCTATTTCGATCCGGCGCGTGCCGGCGTGTCAACCTGGATCTTCACCATCGCCCGCAATGCCCGGATCGACCGGTTGCGCCGCGAAGGCCGACCAGCGGCGGTTGCGGAGGCATTCGATCCGTCGGATGAGCCGGACGCGCCGGTTTCGGGCGAACAGGCGGTGATCGCCGCCGAGCGCGAAGAGCGCGTACGCACCGCGCTCGGGCTCTTGCCGCGCGAGCAGGCCGAGATCCTGAAGATGTCATTCTTCGGCGAGGAAACCCAATCTCAGATCGCGAGCGCTTTCGGCATCCCGCTCGGCACCGTCAAATCGCGCGTCCGGCTGGCCCTCGGCCGCCTGCGCCAAATCCTGGACGACCTCAAATGA
PROTEIN sequence
Length: 219
MNASGHHFIADKAFLAFEVAKTGLAVTMRKDEESPSAPEASRLLAAVAADRDRAAFAVLFGFYAPRVKAFLRRSGMTASAAEDVAQETMLIVWKKASYFDPARAGVSTWIFTIARNARIDRLRREGRPAAVAEAFDPSDEPDAPVSGEQAVIAAEREERVRTALGLLPREQAEILKMSFFGEETQSQIASAFGIPLGTVKSRVRLALGRLRQILDDLK*