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SCNpilot_cont_1000_bf_scaffold_49_curated

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Displaying items 1-30 of 684 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_49_curated_1
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

531..2723
DNA (2193bp) protein (731aa)
Putative plasmid stabilization protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98NX2_RHILO
Putative plasmid stabilization protein {ECO:0000313|EMBL:BAB54883.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
putative plasmid stabilization protein; K03497 chromosome partitioning protein, ParB family rbh
SCNpilot_cont_1000_bf_scaffold_49_curated_2
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2883..7745
DNA (4863bp) protein (1621aa)
methylase n=1 Tax=Rhizobium loti RepID=UPI00036255BD
Probably methylase/helicase {ECO:0000313|EMBL:BAB54884.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
methylase/helicase rbh
SCNpilot_cont_1000_bf_scaffold_49_curated_3
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7742..8260
DNA (519bp) protein (173aa)
DNA primase n=1 Tax=Rhizobium loti RepID=UPI0003754518
hypothetical protein
Mlr9705 protein {ECO:0000313|EMBL:BAB54885.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_bf_scaffold_49_curated_4
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8612..9541
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00035DB337
Uncharacterized protein {ECO:0000313|EMBL:CDX37891.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_49_curated_5
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9898..10065
DNA (168bp) protein (56aa)
Msr9708 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98NW8_RHILO
hypothetical protein
Msr9708 protein {ECO:0000313|EMBL:BAB54887.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_bf_scaffold_49_curated_6
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10112..11185)
DNA (1074bp) protein (358aa)
DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] rbh
DNA polymerase IV 3; Short=Pol IV 3;; EC=2.7.7.7;; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
DNA polymerase IV 3 n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=DPO43_RHILO rbh
SCNpilot_cont_1000_bf_scaffold_49_curated_7
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12028..12540)
DNA (513bp) protein (171aa)
Nucleotidyltransferase n=3 Tax=Sphingobium RepID=T0GXG5_9SPHN
Protein ImuB {ECO:0000313|EMBL:CDX51872.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
putative nucleotidyltransferase; K14161 protein ImuB
SCNpilot_cont_1000_bf_scaffold_49_curated_8
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12584..13336)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QHN2_BREDI
Uncharacterized protein {ECO:0000313|EMBL:CDX51878.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein; K14160 protein ImuA
SCNpilot_cont_1000_bf_scaffold_49_curated_9
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13563..14261
DNA (699bp) protein (233aa)
UPI0003CDF902 related cluster n=1 Tax=unknown RepID=UPI0003CDF902
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CDX19920.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_49_curated_10
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14270..15844
DNA (1575bp) protein (525aa)
ABC transporter; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
UPI0003CFC5FF related cluster n=1 Tax=unknown RepID=UPI0003CFC5FF
Fused D-xylose transporter subunits of ABC superfamily: ATP-binding components {ECO:0000313|EMBL:CDX33376.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
SCNpilot_cont_1000_bf_scaffold_49_curated_11
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15841..16833
DNA (993bp) protein (331aa)
UPI0003D06366 related cluster n=1 Tax=unknown RepID=UPI0003D06366
Inner-membrane translocator {ECO:0000313|EMBL:CDX33379.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
sugar ABC transporter ATPase; K10440 ribose transport system permease protein
SCNpilot_cont_1000_bf_scaffold_49_curated_12
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16896..17846
DNA (951bp) protein (317aa)
UPI0003CFCEA3 related cluster n=1 Tax=unknown RepID=UPI0003CFCEA3
ABC transporter, periplasmic solute-binding protein {ECO:0000313|EMBL:CDX33382.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
ABC transporter periplasmic protein; K10439 ribose transport system substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_49_curated_13
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17914..18507
DNA (594bp) protein (198aa)
UPI0003D03BCA related cluster n=1 Tax=unknown RepID=UPI0003D03BCA
Uncharacterized protein {ECO:0000313|EMBL:CDX45178.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_49_curated_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19207..20481
DNA (1275bp) protein (425aa)
peptidase M20D, amidohydrolase (EC:3.5.1.32); K01451 hippurate hydrolase [EC:3.5.1.32]
Peptidase M20D, amidohydrolase {ECO:0000313|EMBL:ABE64643.1}; EC=3.5.1.32 {ECO:0000313|EMBL:ABE64643.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Peptidase M20D, amidohydrolase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGK4_NITHX
SCNpilot_cont_1000_bf_scaffold_49_curated_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20432..21271
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGK3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64644.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_1000_bf_scaffold_49_curated_16
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21739..22113
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037D3718
Uncharacterized protein {ECO:0000313|EMBL:CDX46899.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_49_curated_17
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22127..23572
DNA (1446bp) protein (482aa)
blue light photoreceptor cryptochrome; K01669 deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] rbh
deoxyribodipyrimidine photo-lyase n=1 Tax=Rhizobium loti RepID=UPI00037F9458
DNA photolyase family protein {ECO:0000313|EMBL:AID31762.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_1000_bf_scaffold_49_curated_18
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23569..23979
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037CA6B2
Uncharacterized protein {ECO:0000313|EMBL:CDX46903.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_49_curated_19
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23958..24608)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00037FAB52
Uncharacterized protein {ECO:0000313|EMBL:CDX46905.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_49_curated_20
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24553..25581)
DNA (1029bp) protein (343aa)
cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Rhizobium loti RepID=UPI00035CD087
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:CDX46907.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
cyclopropane-fatty-acyl-phospholipid synthase rbh
SCNpilot_cont_1000_bf_scaffold_49_curated_21
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25584..26408)
DNA (825bp) protein (275aa)
membrane protein n=1 Tax=Rhizobium loti RepID=UPI00035D2EA1
Uncharacterized protein {ECO:0000313|EMBL:CDX55564.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_49_curated_22
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26416..27066)
DNA (651bp) protein (217aa)
Transcriptional regulator n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q984A2_RHILO
transcriptional regulator; K07167 putative transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:BAB53728.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_bf_scaffold_49_curated_23
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27063..27719)
DNA (657bp) protein (219aa)
RNA polymerase sigma factor RpoE n=1 Tax=Rhizobium loti RepID=UPI0003663D17
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
RNA polymerase sigma factor RpoE; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
SCNpilot_cont_1000_bf_scaffold_49_curated_24
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27865..29211
DNA (1347bp) protein (449aa)
NADH-ubiquinone oxidoreductase subunit 6 n=1 Tax=Rhizobium loti RepID=UPI00036F84E0
FAD dependent oxidoreductase family protein {ECO:0000313|EMBL:AID31769.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein; K06954 rbh
SCNpilot_cont_1000_bf_scaffold_49_curated_25
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29211..30026
DNA (816bp) protein (272aa)
Mll8086 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q984A5_RHILO
Uncharacterized protein {ECO:0000313|EMBL:CDX55560.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein; K09701 hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_49_curated_26
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30013..31236
DNA (1224bp) protein (408aa)
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:CDX46918.1}; EC=2.1.1.79 {ECO:0000313|EMBL:CDX46918.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79); K00574 cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NUL1_AFIFE
SCNpilot_cont_1000_bf_scaffold_49_curated_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31288..31770
DNA (483bp) protein (161aa)
Tryptophan-rich sensory protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I2R4_9RHIZ
Tryptophan-rich sensory protein {ECO:0000313|EMBL:EHK52763.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
tryptophan-rich sensory protein; K07185 tryptophan-rich sensory protein
SCNpilot_cont_1000_bf_scaffold_49_curated_28
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32093..33583
DNA (1491bp) protein (497aa)
RecA-superfamily ATPase possibly involved in signal transduction n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KIL9_MESAW
RecA-superfamily ATPase possibly involved in signal transduction
RecA-superfamily ATPase possibly involved in signal transduction {ECO:0000313|EMBL:AGB45192.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_1000_bf_scaffold_49_curated_29
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33580..34620
DNA (1041bp) protein (347aa)
Signal transduction histidine kinase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KM77_MESAW
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AGB45193.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_1000_bf_scaffold_49_curated_30
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34757..35872
DNA (1116bp) protein (372aa)
PAS domain S-box n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KLF5_MESAW
PAS domain S-box
PAS domain S-box {ECO:0000313|EMBL:AGB45510.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
Displaying items 1-30 of 684 in total

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