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SCNpilot_cont_1000_bf_scaffold_307_curated_26

Organism: scnpilot_dereplicated_Mesorhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 22639..25215

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F652_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 912.0
  • Bit_score: 876
  • Evalue 2.20e-251
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:CCV11791.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 912.0
  • Bit_score: 876
  • Evalue 3.20e-251
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 723.0
  • Bit_score: 769
  • Evalue 9.30e-220

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Taxonomy

Mesorhizobium sp. STM 4661 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2577
ATGGCCGACAGGGAAAACCGCGAAGACTGGAGGCGCGAGCGTTCGCTGCTTGCGCTCAGCCAGGCGATGCGGGGCAACGAGGACCAGCGCATGTCGCCAGCTTCGGCGGGCGACCGCGTCGACCCGTCGTGGCGCGAGGATGCCGCGGCGCGCCATCGCCTTGCGCGCGCGTTGCGCGAAGCGCGGGAGGCGCGGCCGGACCCGCAGACCGACCCGACCATCGATGATGGTGCACCCGCGCCGGCCGAAGCCGCATCGGTCAAGAGAAGCCCTTCCGGGCTTGGCCGGATTTTGCCGCGCTGGCCGCGGCGAGGAAAGCAGCGCGCGGCGCTCGTCGAGGAACCGAAGGCCGACCAACCGCAGCCCCCTCCACCCGAACCGTCGATACCACCGCTGGTGCCGCCGGTCCCATCGGTGGCAATCCCTGAGCCGCCGCCCCCCCCGGCAACCCCGGTCCCGCCGCCGACCCCCTCGGCTCCGCCGCCGTCACCCACGGTAATCCAGTCGCAGCCGCCGGCGGCCGCCGTGGAACCCCGCATCCCACGCGATCCCCCGGCCTCCCAATCCGAACGGGTCGCCGTCGAGAGTGCCGTACCGGTCTCTTCCGGAACGGCAGACGGCCAGGAATGGAAGCCGTTGATCGATCCGGCGCGCATCATTGGCGGTATCGCCAGGTCGAAGAGGCTGATCCTGGCCACGACGATCCTTGGGACGGCGTTGGGCGTGGCGGTCGCCGTATCGACGCCCAAGAAGTACGAGGCAACCACCGAGGTTATCGTTGACCCACGCGACCTGAAGCTCACCGATCGCGACCTGACGCAGAATGTCATCGCCTCAGACGCGACGCTGGCAATCGTCGAGAACCAGGTGCGCATCCTCACGTCGGGCGATGTCCTCGACAAGGTCGTCACTCAACTCAACCTCACCAACGATCCCGAGTTCAACGGCCAGGGCAAGAGTGGTCTTGGCCTGATCTCGATGCTCCGCTCCTTCCTGTCCCGGCAGGAGGCGGACGCGGGCTCCAGCGATGCCCGTACCCGCGCGCTGGCAATCCGCAATCTGGCGAGAAGCCTGGACGTCGAGCGCGGCGGCAAGACCTTCGTCGTCTCGATCAGCGCGACCACGCAGAATCCCGACAAGTCGGCGCTGATCGCCAACACGACGAGAACGGCTTTCCAACAGATCTCGAGCGAACTCCAGTCCAAGACGGCGGGGCGAGCTTCCGACGAACTCACCGCCAGGCTCGACGAATTGCGCAAGGGCGTCGAGGCGGCCGAGCGCCAGGTCGAGGATTTCCGGTCCTCGCACGACCTCGTCGACGCGCAGGGCCGGCTGATCAGCGACGACGAGATGCTGAAGCTCAACGAACAGCTCTCGATCGCGCGCGCCCGCACCCTCGAACTGAACGCGCGCGCCGCCTCGGCGCGTGGCACCGACGTCAATGCGGTGCTGAGCGGCACATTGCCGGAGGAAATCAACTCGAACACGATGAACGACCTGCGCGCGCAATATGCGGCGTTGAAGCAGGAGGCGGACAGGGCCGCGGTCAAGCTCGGGCCGCGCCATCCCGAGATACAGGCGCTCAACGCCCAGCTCGCTGGAGCGCGCGATCGCATCGCGGCCGAACTGCAGCGCATCGCCTCCTCGCTGCAGGTCGATCTCACGCGCGCCGTGCAACTGGAGCAGGACCTTGCGTCCCGCATGGCGCAGGCCAAGGTGCGCAGTGGCGACGTCAACAACGACCTTGTCTCACTGCGCGAACTGGAGCGCGTGGCGACTGCCAGACGCCAGGTCTACGAACAGTTCCTGCTGCGCGCGAAGGAGACCAGCGAGCAGAAGGACATCAACACGGCCAACATCAACGTCATCTCGCCGGCCCTGGCGCCGCTGGAGGCGAAAGGCCCGTCGCGCGCCGTGATTGCGCTCGCCGGCCTGTTGCTGGGCCTTGTCTCCGGCATCGGGATCGGGGCCATGCGCGGCGCCTATGAGAGCCTGCGCGAAACCGCCGACACGCGCACCCGCCGGGGGCAGGCCCCTCGCACGCCGCCGGTCGAGGACGATGACCGCCAACGCTCCGCTCCGGCTGCGGCGACACAGCCGGTCCGCGTTGACCCCGACAGCGGATTGTCCGCCGCCGACAAGGAACAGGAAGGTCCCATCGCCACGGCGGCCGACGCGCCCGCCGGGTCAACTGTCGAAAGGCCGCTGGATACCCCGGCCCATCGTGCCAGCCAGGACATCGGTATGTCCCCGACAGCGGACGAGCCGCTGTGGCATCGTGGTGCCGATCATCCCTATCCATCGCAGCCGCGTGAACAGGCTCGCTATTCGCCGTACCTGCCAGAGCCGGCCGACTATCCTTCGCGGTCGAGGGCTGCCTATCCCCAGGGCCCCGATCCGTTGCCGCGAGCGGACGATCCCCCGCGTCCACCGCTCGATCCCGAGGTTTCGCGCCGTGAGGCCACTGATGTGGCCGAACAGCAGGCTTCGATCGAGGAGATCCGCGCCAGCCTGCGGGAGTTCCGCGAGGCGGTCCGCGAACTCAGCAAGAGCCGGTCCGGCAAGCGCTACTTCTAG
PROTEIN sequence
Length: 859
MADRENREDWRRERSLLALSQAMRGNEDQRMSPASAGDRVDPSWREDAAARHRLARALREAREARPDPQTDPTIDDGAPAPAEAASVKRSPSGLGRILPRWPRRGKQRAALVEEPKADQPQPPPPEPSIPPLVPPVPSVAIPEPPPPPATPVPPPTPSAPPPSPTVIQSQPPAAAVEPRIPRDPPASQSERVAVESAVPVSSGTADGQEWKPLIDPARIIGGIARSKRLILATTILGTALGVAVAVSTPKKYEATTEVIVDPRDLKLTDRDLTQNVIASDATLAIVENQVRILTSGDVLDKVVTQLNLTNDPEFNGQGKSGLGLISMLRSFLSRQEADAGSSDARTRALAIRNLARSLDVERGGKTFVVSISATTQNPDKSALIANTTRTAFQQISSELQSKTAGRASDELTARLDELRKGVEAAERQVEDFRSSHDLVDAQGRLISDDEMLKLNEQLSIARARTLELNARAASARGTDVNAVLSGTLPEEINSNTMNDLRAQYAALKQEADRAAVKLGPRHPEIQALNAQLAGARDRIAAELQRIASSLQVDLTRAVQLEQDLASRMAQAKVRSGDVNNDLVSLRELERVATARRQVYEQFLLRAKETSEQKDINTANINVISPALAPLEAKGPSRAVIALAGLLLGLVSGIGIGAMRGAYESLRETADTRTRRGQAPRTPPVEDDDRQRSAPAAATQPVRVDPDSGLSAADKEQEGPIATAADAPAGSTVERPLDTPAHRASQDIGMSPTADEPLWHRGADHPYPSQPREQARYSPYLPEPADYPSRSRAAYPQGPDPLPRADDPPRPPLDPEVSRREATDVAEQQASIEEIRASLREFREAVRELSKSRSGKRYF*