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SCNpilot_cont_1000_bf_scaffold_307_curated

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Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_307_curated_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

99..1166
DNA (1068bp) protein (356aa)
ABC transporter ATP-binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y8H3_9RHIZ
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDX16369.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
glycine betaine/L-proline transport ATP binding subunit
SCNpilot_cont_1000_bf_scaffold_307_curated_2
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1163..3274
DNA (2112bp) protein (704aa)
Glycine betaine/proline ABC transporter, permease protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y8H4_9RHIZ
Glycine betaine/proline ABC transporter, permease protein {ECO:0000313|EMBL:CDX16372.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
proline/glycine betaine ABC transporter permease protein
SCNpilot_cont_1000_bf_scaffold_307_curated_3
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3284..3847)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YZM9_PARAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT10666.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_cont_1000_bf_scaffold_307_curated_4
unknown

Not on your lists

comp(4143..4448)
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_307_curated_5
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4688..5053)
DNA (366bp) protein (122aa)
hypothetical protein, partial n=1 Tax=Methylocystis parvus RepID=UPI00036471F0
Uncharacterized protein {ECO:0000313|EMBL:CCE01599.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_307_curated_6
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5219..5752)
DNA (534bp) protein (178aa)
hypothetical protein, partial n=1 Tax=Methylocystis parvus RepID=UPI0003814606
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL76731.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCNpilot_cont_1000_bf_scaffold_307_curated_trna_3
unknown

Not on your lists

comp(6003..6075)
DNA (73bp)
transferRNA
SCNpilot_cont_1000_bf_scaffold_307_curated_7
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6249..6446)
DNA (198bp) protein (66aa)
UPI0003CFDE06 related cluster n=1 Tax=unknown RepID=UPI0003CFDE06
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein; K09862 hypothetical protein
SCNpilot_cont_1000_bf_scaffold_307_curated_8
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6443..7072)
DNA (630bp) protein (210aa)
septum formation protein Maf n=1 Tax=Rhizobium loti RepID=UPI00036B7ECF
Maf-like protein maf {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
maf protein; K06287 septum formation protein
SCNpilot_cont_1000_bf_scaffold_307_curated_9
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7169..7387)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=12 Tax=Phyllobacteriaceae RepID=IF1_RHILO
translation initiation factor IF-1; K02518 translation initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
SCNpilot_cont_1000_bf_scaffold_307_curated_10
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7578..7988)
DNA (411bp) protein (137aa)
UPI0003D03A5F related cluster n=1 Tax=unknown RepID=UPI0003D03A5F
Phosphotyrosine protein phosphatase {ECO:0000313|EMBL:ESZ30443.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
protein-tyrosine phosphatase, low molecular weight
SCNpilot_cont_1000_bf_scaffold_307_curated_11
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8035..8520)
DNA (486bp) protein (162aa)
UPI0003CFCA6D related cluster n=1 Tax=unknown RepID=UPI0003CFCA6D
UPF0262 protein X737_34575 {ECO:0000256|HAMAP-Rule:MF_00678}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_307_curated_12
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8523..9815)
DNA (1293bp) protein (431aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
histidinol dehydrogenase (EC:1.1.1.23); K00013 histidinol dehydrogenase [EC:1.1.1.23]
UPI0003CDE4DC related cluster n=1 Tax=unknown RepID=UPI0003CDE4DC
SCNpilot_cont_1000_bf_scaffold_307_curated_13
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9827..10261)
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6B2_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH12602.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
Protein of unknown function (DUF2948)
SCNpilot_cont_1000_bf_scaffold_307_curated_14
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10485..11777)
DNA (1293bp) protein (431aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
UDP-N-acetylglucosamine1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y6B1_9RHIZ
SCNpilot_cont_1000_bf_scaffold_307_curated_15
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11909..12085)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJW1_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB44830.1}; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_1000_bf_scaffold_307_curated_trna_1
unknown

Not on your lists

12279..12350
DNA (72bp)
transferRNA
SCNpilot_cont_1000_bf_scaffold_307_curated_16
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12484..12762)
DNA (279bp) protein (93aa)
Mlr7483 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q985X7_RHILO
NADH-ubiquinone oxidoreductase chain E protein {ECO:0000313|EMBL:AID28799.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_307_curated_17
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12996..13322)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000373B535
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDX29034.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_cont_1000_bf_scaffold_307_curated_18
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13475..14809
DNA (1335bp) protein (445aa)
homoserine dehydrogenase n=1 Tax=Rhizobium loti RepID=UPI000379B15E
SAF domain protein {ECO:0000313|EMBL:CDX33248.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
putative homoserine dehydrogenase
SCNpilot_cont_1000_bf_scaffold_307_curated_19
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14784..15599)
DNA (816bp) protein (272aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] rbh
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
Pyrroline-5-carboxylate reductase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q989B5_RHILO
SCNpilot_cont_1000_bf_scaffold_307_curated_20
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15720..17039)
DNA (1320bp) protein (440aa)
O-antigen polymerase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YB91_9RHIZ
O-antigen polymerase {ECO:0000313|EMBL:EHH10972.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
lipid A core-O-antigen ligase-like enyme
SCNpilot_cont_1000_bf_scaffold_307_curated_21
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17008..18006)
DNA (999bp) protein (333aa)
Glycosyl transferase family 2 n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TM42_MESCW
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:ADV11541.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_1000_bf_scaffold_307_curated_22
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18177..19349
DNA (1173bp) protein (391aa)
Mannosyl transferase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F5Q6_9RHIZ
Glycosyl transferase {ECO:0000313|EMBL:ESZ18239.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
mannosyl transferase
SCNpilot_cont_1000_bf_scaffold_307_curated_23
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19346..20158
DNA (813bp) protein (271aa)
Glycosyl transferase, WecB/TagA/CpsF family n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TM44_MESCW
WecB/TagA/CpsF family glycosyl transferase
Glycosyl transferase, WecB/TagA/CpsF family {ECO:0000313|EMBL:ADV11543.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_1000_bf_scaffold_307_curated_24
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20155..21075
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TM45_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDX60969.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_cont_1000_bf_scaffold_307_curated_25
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21088..22413)
DNA (1326bp) protein (442aa)
Succinoglycan biosynthesis transport protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TM46_MESCW
succinoglycan biosynthesis transporter
Succinoglycan biosynthesis transport protein {ECO:0000313|EMBL:ADV11545.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_1000_bf_scaffold_307_curated_26
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22639..25215
DNA (2577bp) protein (859aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F652_9RHIZ
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:CCV11791.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
lipopolysaccharide biosynthesis protein
SCNpilot_cont_1000_bf_scaffold_307_curated_27
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25482..26381
DNA (900bp) protein (300aa)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5 3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
Bifunctional protein FolD n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7XZM2_MESOW
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_cont_1000_bf_scaffold_307_curated_28
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26498..27400
DNA (903bp) protein (301aa)
Transcriptional regulator, AraC family n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F6K4_9RHIZ
HTH-type transcriptional regulator CdhR {ECO:0000313|EMBL:CDX43121.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
AraC family transcriptional regulator
Displaying items 1-30 of 94 in total

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