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SCNpilot_cont_1000_bf_scaffold_307_curated

Search features with annotation key words

Displaying items 31-60 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_307_curated_29
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

27562..29049
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X4D7_ACISM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADW68264.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
SCNpilot_cont_1000_bf_scaffold_307_curated_30
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29215..30915
DNA (1701bp) protein (567aa)
UPI0003CDE34F related cluster n=1 Tax=unknown RepID=UPI0003CDE34F
von Willebrand factor type A {ECO:0000313|EMBL:ESY73807.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
von Willebrand factor type A; K07114 uncharacterized protein
SCNpilot_cont_1000_bf_scaffold_307_curated_31
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30982..32805)
DNA (1824bp) protein (608aa)
6-phosphogluconate dehydratase {ECO:0000313|EMBL:CDX43127.1}; EC=4.2.1.12 {ECO:0000313|EMBL:CDX43127.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
phosphogluconate dehydratase (EC:4.2.1.12); K01690 phosphogluconate dehydratase [EC:4.2.1.12] rbh
phosphogluconate dehydratase n=1 Tax=Rhizobium loti RepID=UPI00037E6901
SCNpilot_cont_1000_bf_scaffold_307_curated_32
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32878..33591)
DNA (714bp) protein (238aa)
6-phosphogluconolactonase {ECO:0000313|EMBL:ETA71219.1}; EC=3.1.1.31 {ECO:0000313|EMBL:ETA71219.1};; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
6-phosphogluconolactonase; K01057 6-phosphogluconolactonase [EC:3.1.1.31] rbh
6-phosphogluconolactonase n=1 Tax=Rhizobium loti RepID=UPI000375223A
SCNpilot_cont_1000_bf_scaffold_307_curated_33
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33573..35042)
DNA (1470bp) protein (490aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YBA3_9RHIZ
SCNpilot_cont_1000_bf_scaffold_307_curated_34
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35368..36114
DNA (747bp) protein (249aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] rbh
3-ketoacyl-ACP reductase n=1 Tax=Rhizobium loti RepID=UPI000366278A
Uncharacterized protein {ECO:0000313|EMBL:ETA71221.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
SCNpilot_cont_1000_bf_scaffold_307_curated_35
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36149..37450
DNA (1302bp) protein (434aa)
Mur ligase middle domain protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIA5_9RHIZ
Mur ligase middle domain protein {ECO:0000313|EMBL:CCV11799.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
Mur ligase middle domain-containing protein
SCNpilot_cont_1000_bf_scaffold_307_curated_36
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37470..38330)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F5S6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV11800.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_307_curated_37
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38649..39935)
DNA (1287bp) protein (429aa)
oxidoreductase; K00540 [EC:1.-.-.-] rbh
Oxidoreductase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YBA6_9RHIZ
Oxidoreductase {ECO:0000313|EMBL:EHH10987.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_cont_1000_bf_scaffold_307_curated_38
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40059..41492)
DNA (1434bp) protein (478aa)
UPI0003CF1B9C related cluster n=1 Tax=unknown RepID=UPI0003CF1B9C
Glutamine synthetase {ECO:0000313|EMBL:ESW84108.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
glutamine synthetase
SCNpilot_cont_1000_bf_scaffold_307_curated_39
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41697..42404
DNA (708bp) protein (236aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FIB3_9RHIZ
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:CCV11804.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
putative HAD superfamily hydrolase
SCNpilot_cont_1000_bf_scaffold_307_curated_40
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(42531..42899)
DNA (369bp) protein (123aa)
UPI0003CF4CF1 related cluster n=1 Tax=unknown RepID=UPI0003CF4CF1
Transcriptional regulator {ECO:0000313|EMBL:ESY73798.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
two-component system, regulatory protein
SCNpilot_cont_1000_bf_scaffold_307_curated_41
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43221..43460)
DNA (240bp) protein (80aa)
Uncharacterized protein n=5 Tax=Mesorhizobium RepID=E8TM62_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDX43163.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
SCNpilot_cont_1000_bf_scaffold_307_curated_42
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43615..44904)
DNA (1290bp) protein (430aa)
isocitrate lyase; K01637 isocitrate lyase [EC:4.1.3.1] rbh
Isocitrate lyase {ECO:0000313|EMBL:ETA71228.1}; EC=4.1.3.1 {ECO:0000313|EMBL:ETA71228.1};; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
Isocitrate lyase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988Z4_RHILO
SCNpilot_cont_1000_bf_scaffold_307_curated_43
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45153..46607
DNA (1455bp) protein (485aa)
UPI0003CF2FF1 related cluster n=1 Tax=unknown RepID=UPI0003CF2FF1
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:ESY66255.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
XRE family transcriptional regulator; K07110
SCNpilot_cont_1000_bf_scaffold_307_curated_44
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46754..47656
DNA (903bp) protein (301aa)
UPI0003CF6CFD related cluster n=1 Tax=unknown RepID=UPI0003CF6CFD
Uncharacterized protein {ECO:0000313|EMBL:ESY73794.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
uncharacterized membrane-anchored protein
SCNpilot_cont_1000_bf_scaffold_307_curated_45
Mesorhizobium sp. L2C066B000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47834..48787
DNA (954bp) protein (318aa)
Membrane protein n=2 Tax=Mesorhizobium RepID=V7EV30_9RHIZ
Membrane protein {ECO:0000313|EMBL:ESZ39482.1}; TaxID=1287105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C066B000.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_307_curated_46
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49141..50238
DNA (1098bp) protein (366aa)
UPI0003CEDA60 related cluster n=1 Tax=unknown RepID=UPI0003CEDA60
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
family 1 extracellular solute-binding protein; K11073 putrescine transport system substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_307_curated_47
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50313..51449
DNA (1137bp) protein (379aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
ABC transporter ATP-binding protein n=2 Tax=Mesorhizobium RepID=V7EXD1_9RHIZ
spermidine/putrescine ABC transporter ATP-binding subunit
SCNpilot_cont_1000_bf_scaffold_307_curated_48
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51459..52430
DNA (972bp) protein (324aa)
ABC-type spermidine/putrescine transport system, permease component I n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJZ8_MESAW
Putrescine transporter subunit: membrane component of ABC superfamily {ECO:0000313|EMBL:CDX33344.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
ABC-type spermidine/putrescine transport system, permease component I
SCNpilot_cont_1000_bf_scaffold_307_curated_49
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52427..53245
DNA (819bp) protein (273aa)
Putrescine transporter subunit: membrane component of ABC superfamily n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EU85_9RHIZ
Putrescine transporter subunit: membrane component of ABC superfamily {ECO:0000313|EMBL:CCV08569.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
binding-protein-dependent transport system inner membrane protein; K11074 putrescine transport system permease protein
SCNpilot_cont_1000_bf_scaffold_307_curated_50
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53499..55385)
DNA (1887bp) protein (629aa)
UPI0003D06357 related cluster n=1 Tax=unknown RepID=UPI0003D06357
AsmA family protein {ECO:0000313|EMBL:CDX16273.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
AsmA family protein; K07289 AsmA protein
SCNpilot_cont_1000_bf_scaffold_307_curated_51
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55570..57528
DNA (1959bp) protein (653aa)
Acetoacetyl-coenzyme A synthetase {ECO:0000313|EMBL:CDX33352.1}; EC=6.2.1.16 {ECO:0000313|EMBL:CDX33352.1};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
acetoacetyl-CoA synthetase (EC:6.2.1.1); K01907 acetoacetyl-CoA synthetase [EC:6.2.1.16] rbh
Acetoacetyl-CoA synthetase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988Y6_RHILO
SCNpilot_cont_1000_bf_scaffold_307_curated_52
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57861..61526)
DNA (3666bp) protein (1222aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
PAS sensor protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TM72_MESCW
PAS sensor protein
SCNpilot_cont_1000_bf_scaffold_307_curated_53
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

61777..62235
DNA (459bp) protein (153aa)
Phasin n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7XZP7_MESOW
phasin
Phasin {ECO:0000313|EMBL:ESY66264.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_cont_1000_bf_scaffold_307_curated_trna_2
unknown

Not on your lists

62578..62651
DNA (74bp)
transferRNA
SCNpilot_cont_1000_bf_scaffold_307_curated_54
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

62933..63178
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KLS4_MESAW
Protein of unknown function (DUF768)
Uncharacterized protein {ECO:0000313|EMBL:ESY98925.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
SCNpilot_cont_1000_bf_scaffold_307_curated_55
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63358..64479)
DNA (1122bp) protein (374aa)
aminopeptidase n=1 Tax=Rhizobium loti RepID=UPI00036F57A8
D-aminopeptidase {ECO:0000313|EMBL:AID28303.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
D-aminopeptidase rbh
SCNpilot_cont_1000_bf_scaffold_307_curated_56
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64490..66070)
DNA (1581bp) protein (527aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6); K03601 exodeoxyribonuclease VII large subunit [EC:3.1.11.6] rbh
Exodeoxyribonuclease 7 large subunit n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EX10_9RHIZ
SCNpilot_cont_1000_bf_scaffold_307_curated_57
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66141..67097)
DNA (957bp) protein (319aa)
LysR family transcriptional regulator n=2 Tax=Mesorhizobium RepID=V7F0T1_9RHIZ
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDX43592.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
LysR family transcriptional regulator
Displaying items 31-60 of 94 in total

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