ggKbase home page

SCNpilot_cont_1000_bf_scaffold_307_curated_40

Organism: scnpilot_dereplicated_Mesorhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(42531..42899)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CF4CF1 related cluster n=1 Tax=unknown RepID=UPI0003CF4CF1 similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 119.0
  • Bit_score: 187
  • Evalue 6.90e-45
Transcriptional regulator {ECO:0000313|EMBL:ESY73798.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 119.0
  • Bit_score: 187
  • Evalue 9.70e-45
two-component system, regulatory protein similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 119.0
  • Bit_score: 185
  • Evalue 8.20e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mesorhizobium sp. LNHC252B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GTGCTGGTGGTGGGGACATCGCCGATCAACAGGGTGGTGGTTTCCAAGATCGTCGAACGTTCCGGCCTCAGGCCCGTTTCAGAATCGCCAGACGTGGCGGCAAGAACGCTTGCCACACTCGTCCCCGGCGCCATCGTCCTGGATGGCGGCGCCGACAACAAGGACTGCGACGGCCTGATATCCGATATCGCCGCGCTGCGGCGCACCTCGGGCCAGTCACAGCCTCCCGTCATCCTGCTTTCCACCAGGAACGGCACGCCCGAGAGCCTGTCCTTGTCGAGTGTGGTCGACGCCGTGGTGGCGAAGCCGATCACCACGGAACGGCTGCAGCCGGTCATCGATCGCCTGGTGCGGCGCGGCGGCAACTGA
PROTEIN sequence
Length: 123
VLVVGTSPINRVVVSKIVERSGLRPVSESPDVAARTLATLVPGAIVLDGGADNKDCDGLISDIAALRRTSGQSQPPVILLSTRNGTPESLSLSSVVDAVVAKPITTERLQPVIDRLVRRGGN*