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SCNpilot_cont_1000_bf_scaffold_416_curated_10

Organism: scnpilot_dereplicated_Mesorhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(10982..11818)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system TrbG/VirB9 family protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SU79_RHIET similarity UNIREF
DB: UNIREF100
  • Identity: 70.6
  • Coverage: 269.0
  • Bit_score: 399
  • Evalue 2.00e-108
type IV secretion system TrbG/VirB9 family protein similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 269.0
  • Bit_score: 399
  • Evalue 6.30e-109
Type IV secretion system TrbG/VirB9 family protein {ECO:0000313|EMBL:AGS25124.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 269.0
  • Bit_score: 399
  • Evalue 2.80e-108

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 837
ATGATGCGTCTGGTCCTGGCCCTGCTGATGACGACCACGGCGGTAGCCGCGCGCGCGGAACTGGTGGCGCAGCCTGGTCTGCAGGACCCGCGCGTCCGCTCAGTCCCTTATTCGGCATCACAGGTGGTTGTCGTAACCGGCACCTACGGCATGATCACGACGATCCTCTTCGGCCAGGATGAGGAGGTGCTGACCGTGACAGTGGGCGATTCCGTATCGTGGCAGATCGTGCTCGCCGCCAACAAGCGGGTGCTCAACATCAAGCCGATGGAGGACGACGCACCTACGAACATGTCCGTGATCACGACGAAACGGACCTACTCGTTCGAATTGCAGGTGAACACCTCGAAATCGAAGCGCGAGCAGACTTACAAGCTTCGCTTCACCTATCCGGAGGATGCGGGCCTGCGCGGCACGGCCGAGATGTGGCGCGAGGCAGAAGAGGCGACGAAGAGCCCCAACATCCAGAACCTGCGCCGCGACAAGGTGAACTTCGAGTACGGCTTCAAGGGCTCGGACGCTGCAAAACCGAACTGGGTCTTCGACGACGGTGTGAAGACCTTCATGCAGTTCACCGGCGACGTTCCCGCGATCTTCATCGTCGACGACCGGCGCCGCGAAAGCCTGGTCAATTACCGCCGCGAGGGCGACTACATCGTCATCGACGCGGTCTCCCGCCAATGGTCGTTGCGCTTGGGCGAGGAAGCCGAGACCTGCCTGTTCAACCTTCGCACGTCGCCGGCGGTCATTCTGGCGCCGGTGGACGGCGCTGTAGCGCCGCGCCGGCTCGGTCGCGCTGGCCGAGCTTTGCCGTCGATCGCGAACAGCGGAAGATAG
PROTEIN sequence
Length: 279
MMRLVLALLMTTTAVAARAELVAQPGLQDPRVRSVPYSASQVVVVTGTYGMITTILFGQDEEVLTVTVGDSVSWQIVLAANKRVLNIKPMEDDAPTNMSVITTKRTYSFELQVNTSKSKREQTYKLRFTYPEDAGLRGTAEMWREAEEATKSPNIQNLRRDKVNFEYGFKGSDAAKPNWVFDDGVKTFMQFTGDVPAIFIVDDRRRESLVNYRREGDYIVIDAVSRQWSLRLGEEAETCLFNLRTSPAVILAPVDGAVAPRRLGRAGRALPSIANSGR*