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SCNpilot_cont_1000_bf_scaffold_416_curated

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_416_curated_1
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

201..575
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J195_POLGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ68740.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_1000_bf_scaffold_416_curated_2
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1580..2026
DNA (447bp) protein (149aa)
UPI0003D03FB2 related cluster n=1 Tax=unknown RepID=UPI0003D03FB2
MucR family transcriptional regulator {ECO:0000313|EMBL:ESZ11054.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
transcriptional regulatory protein
SCNpilot_cont_1000_bf_scaffold_416_curated_3
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2153..3916)
DNA (1764bp) protein (588aa)
UPI0003CFC37D related cluster n=1 Tax=unknown RepID=UPI0003CFC37D
Uncharacterized protein {ECO:0000313|EMBL:ESZ11001.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_416_curated_4
unknown

Not on your lists

4365..5141
DNA (777bp) protein (259aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_416_curated_5
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4997..5791)
DNA (795bp) protein (265aa)
UPI0003D02C46 related cluster n=1 Tax=unknown RepID=UPI0003D02C46
Chromosome partitioning protein {ECO:0000313|EMBL:ESZ10998.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
chromosome partitioning ATPase
SCNpilot_cont_1000_bf_scaffold_416_curated_6
unknown

Not on your lists

comp(5791..5931)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_416_curated_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5928..8609)
DNA (2682bp) protein (894aa)
Type IV secretory pathway, VirD4 component n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0GXI6_RHILT
Type IV secretory pathway, VirD4 component {ECO:0000313|EMBL:EJB02320.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
TRAG family protein
SCNpilot_cont_1000_bf_scaffold_416_curated_8
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8584..9609)
DNA (1026bp) protein (342aa)
P-type DNA transfer ATPase VirB11 n=1 Tax=Rhizobium sp. IRBG74 RepID=U4Q748_9RHIZ
P-type DNA transfer ATPase VirB11
P-type DNA transfer ATPase VirB11 {ECO:0000313|EMBL:CDI11905.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
SCNpilot_cont_1000_bf_scaffold_416_curated_9
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9606..10970)
DNA (1365bp) protein (455aa)
conjugal transfer protein TrbI n=1 Tax=Rhizobium leguminosarum RepID=UPI00037597E9
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
Conjugation TrbI family protein {ECO:0000313|EMBL:ACI59589.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_cont_1000_bf_scaffold_416_curated_10
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10982..11818)
DNA (837bp) protein (279aa)
Type IV secretion system TrbG/VirB9 family protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5SU79_RHIET
type IV secretion system TrbG/VirB9 family protein
Type IV secretion system TrbG/VirB9 family protein {ECO:0000313|EMBL:AGS25124.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCNpilot_cont_1000_bf_scaffold_416_curated_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11815..12525)
DNA (711bp) protein (237aa)
Type IV secretory pathway, component VirB8 n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0HCX2_RHILT
Type IV secretory pathway, component VirB8 {ECO:0000313|EMBL:EJB08305.1}; Flags: Precursor;; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
VirB8 family protein; K03203 type IV secretion system protein VirB8
SCNpilot_cont_1000_bf_scaffold_416_curated_12
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12695..13711)
DNA (1017bp) protein (339aa)
TrbL/VirB6 plasmid conjugal transfer protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B6A5A3_RHILW
TrbL/VirB6 plasmid conjugal transfer protein; K03201 type IV secretion system protein VirB6
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:ACI59586.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_cont_1000_bf_scaffold_416_curated_13
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13725..13922)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0HCY5_RHILT
Uncharacterized protein {ECO:0000313|EMBL:EJB08303.1}; Flags: Precursor;; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_416_curated_14
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13919..14689)
DNA (771bp) protein (257aa)
UPI0003D02C88 related cluster n=1 Tax=unknown RepID=UPI0003D02C88
Conjugal transfer protein {ECO:0000313|EMBL:ESZ11031.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
conjugal transfer protein
SCNpilot_cont_1000_bf_scaffold_416_curated_15
Rhizobium sp. IRBG74, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14717..15883)
DNA (1167bp) protein (389aa)
Soluble lytic murein transglycosylase-like protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4QE79_9RHIZ
Soluble lytic murein transglycosylase-like protein
Soluble lytic murein transglycosylase-like protein {ECO:0000313|EMBL:CDI11898.1}; TaxID=424182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. IRBG74.;"
SCNpilot_cont_1000_bf_scaffold_416_curated_16
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15864..18365)
DNA (2502bp) protein (834aa)
UPI0003D00830 related cluster n=1 Tax=unknown RepID=UPI0003D00830
ATPase {ECO:0000313|EMBL:ESZ11033.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
trbE; TrbE
SCNpilot_cont_1000_bf_scaffold_416_curated_17
Rhizobium nepotum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18366..18692)
DNA (327bp) protein (109aa)
Type IV secretory pathway VirB3 family protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B6A598_RHILW
Type VI secretion protein {ECO:0000313|EMBL:KJF65665.1}; TaxID=1368418 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium nepotum 39/7.;"
type IV secretory pathway VirB3 family protein; K03198 type IV secretion system protein VirB3
SCNpilot_cont_1000_bf_scaffold_416_curated_18
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18702..19082)
DNA (381bp) protein (127aa)
Type IV secretory pathway, VirB2 component (Pilin) n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0HCY2_RHILT
Type IV secretory pathway, VirB2 component (Pilin) {ECO:0000313|EMBL:EJB08298.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
Conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2
SCNpilot_cont_1000_bf_scaffold_416_curated_19
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19082..19771)
DNA (690bp) protein (230aa)
UPI0003CFBF03 related cluster n=1 Tax=unknown RepID=UPI0003CFBF03
Uncharacterized protein {ECO:0000313|EMBL:ESZ11036.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
lytic transglycosylase-like protein
SCNpilot_cont_1000_bf_scaffold_416_curated_20
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20422..20853)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4QE74_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDN95510.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
exported protein of unknown function
SCNpilot_cont_1000_bf_scaffold_416_curated_21
unknown

Not on your lists

comp(20862..21365)
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_416_curated_22
unknown

Not on your lists

22462..22935
DNA (474bp) protein (158aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_416_curated_23
unknown

Not on your lists

comp(23242..23580)
DNA (339bp) protein (113aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_416_curated_24
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23911..24519
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae RepID=E7EJA8_RHILV
Nuclease SNase-like protein {ECO:0000313|EMBL:CDN95488.1}; Flags: Precursor;; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_416_curated_25
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24516..25169
DNA (654bp) protein (218aa)
Nuclease SNase-like protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S5E6_RHIET
nuclease SNase-like protein
Nuclease SNase-like protein {ECO:0000313|EMBL:AGS25135.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCNpilot_cont_1000_bf_scaffold_416_curated_26
unknown

Not on your lists

25325..25483
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_416_curated_27
unknown

Not on your lists

25501..25830
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_416_curated_28
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25853..26413
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035EE38D
Uncharacterized protein {ECO:0000313|EMBL:ADV31300.2}; TaxID=387 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_416_curated_29
unknown

Not on your lists

comp(26433..26756)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_416_curated_30
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27011..28351
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. viciae RepID=E7EJA3_RHILV
Uncharacterized protein {ECO:0000313|EMBL:ADV31299.1}; TaxID=387 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae.;"
hypothetical protein
Displaying items 1-30 of 59 in total

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