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SCNpilot_cont_1000_bf_scaffold_375_curated_5

Organism: scnpilot_dereplicated_Mesorhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(4413..5726)

Top 3 Functional Annotations

Value Algorithm Source
MiaB-like tRNA modifying protein YliG; K14441 ribosomal protein S12 methylthiotransferase [EC:2.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 437.0
  • Bit_score: 859
  • Evalue 3.50e-247
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=765698 species="Bacteria; Pro similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 437.0
  • Bit_score: 859
  • Evalue 1.60e-246
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8T8T1_MESCW similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 437.0
  • Bit_score: 859
  • Evalue 1.10e-246

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Taxonomy

Mesorhizobium ciceri → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1314
ATGACCGCCCCTCGCGTCAGTTTCGTCAGCCTTGGATGCCCGAAGGCGCTCGTCGACTCCGAGCGCATCATCACCCGGCTGCGTGCCGAGGGCTACGAAATCACGCGCAAGCATGATGGAGCCGACCTGGTGGTGGTCAACACTTGCGGCTTCCTGGATTCGGCGCGTGATGAATCGTTGGGAGCGATCGGTTCCGCACTTTCGGAGAACGGCCGCGTCATCGTCACCGGCTGTCTCGGCGCCGAGCCGGATGTGATCCGCGAGAAGCATCCCAACGTGCTGGCCATTACCGGTCCGCAGGCCTACGAAAGCGTCATGGCCGCCGTGCACGAGGCAGCTCCGCCGAGCCATGATCCCTACATCGACCTGTTGCCGCCGCAAGGCATCAAGCTCACGCCGAGGCACTACGCCTATCTCAAGATCTCGGAAGGCTGCAACAACCGCTGCACCTTCTGCATCATCCCCGCTTTGCGCGGTGATCTCGTCTCAAGGCCGGCGGCCGACGTGCTGCGCGAGGCCGAGAAACTCGCCAAGGCAGGCGTGAAGGAGATCCTCGTCATCTCGCAGGATACCAGCGCCTACGGCATCGACATCAAGTACCAGACGAGCATGTATGGCGATCGCGAAGTGCGGGCCAAATTCCTCGATCTCTCCGAGGAACTCGGCAAGCTCGGGGTATGGGTGCGTATGCACTACGTCTACCCCTACCCGCACGTCGCCGACGTCATTCCGCTGATGGCCGAGGGCAAGATCCTGCCCTATCTGGACATCCCCTTCCAGCATGCTTCACCGGGCGTGCTGAAGAACATGCGTCGCCCGGCCCATGGCGAAAAGACGCTGGAGCGCATTCGTGGCTGGCGCGAAATCTGCCCGGATCTCGCTATCCGGTCGACCTTCATCGTCGGCTTCCCTGGTGAGACCGAGGAGGATTTCGAGATGCTGCTCGACTGGCTGGACGAGGCCAAGATCGATCGCGCGGGCTGTTTCAAATATGAGCCCGTCAAGGGCGCCCGCTCCAACGATCTCGGCCTCGAGGAAGTGCCGCAGGAGATCAAGGAAGCGCGCTGGCATCGCTTCATGCAGCGCCAGCAGAAGATCTCGGCCGCCAAGCTCGCCAGGAAGGTCGGCAAGCGCCTGCCCGTGCTCATCGACGAGGCCCATGGCACGTCGGCGAAAGGCCGCACGAAATACGACGCGCCGGAGATCGACGGCTCCGTCCACATCCAGTCGCGCCGCCCGCTGCGCGCCGGCGACATCGTCACCGTCAAGATCGATCGCGCCGATGCCTACGATCTTTATGGATCGGCCGTCTGA
PROTEIN sequence
Length: 438
MTAPRVSFVSLGCPKALVDSERIITRLRAEGYEITRKHDGADLVVVNTCGFLDSARDESLGAIGSALSENGRVIVTGCLGAEPDVIREKHPNVLAITGPQAYESVMAAVHEAAPPSHDPYIDLLPPQGIKLTPRHYAYLKISEGCNNRCTFCIIPALRGDLVSRPAADVLREAEKLAKAGVKEILVISQDTSAYGIDIKYQTSMYGDREVRAKFLDLSEELGKLGVWVRMHYVYPYPHVADVIPLMAEGKILPYLDIPFQHASPGVLKNMRRPAHGEKTLERIRGWREICPDLAIRSTFIVGFPGETEEDFEMLLDWLDEAKIDRAGCFKYEPVKGARSNDLGLEEVPQEIKEARWHRFMQRQQKISAAKLARKVGKRLPVLIDEAHGTSAKGRTKYDAPEIDGSVHIQSRRPLRAGDIVTVKIDRADAYDLYGSAV*