ggKbase home page

SCNpilot_cont_1000_bf_scaffold_60_curated_12

Organism: scnpilot_dereplicated_Mesorhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(10507..11385)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=2 Tax=Rhizobium meliloti RepID=UPI00038031CC similarity UNIREF
DB: UNIREF100
  • Identity: 36.2
  • Coverage: 282.0
  • Bit_score: 199
  • Evalue 4.20e-48
RpiR family transcriptional regulator {ECO:0000313|EMBL:KGM33608.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.4
  • Coverage: 279.0
  • Bit_score: 193
  • Evalue 3.20e-46
HTH-type transcriptional regulator-like protein similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 280.0
  • Bit_score: 187
  • Evalue 6.70e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Inquilinus limosus → Inquilinus → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
GTGAAGAAAGCCAGTGAAAACCCCGCTTCGGGAGAAGACAGCCTGCAGGCCAGGCTGCAAAGGAACGTACCGCTGTTCACCCGCGCGGAACGCGCGCTGGCCAGTTACATGCTCTCCAACATCGAGCGCATTCCGTTCGAAACAGCGAGCAGCATCGCGGACACGGTTGGCACCAGCAAGATGACGGTCAGCCGCTTTCTGCGAAAGAACGGCTATCAGGGGCTGGCCGAGGTCCGGCGCGAGCTTCGCCGCAAATTCGCGATCGGCAACTACCAGGTCAGCAACCGCGTCGACCGCTTCCTGAAGGCCAAGAGCCAGGACGACAAGCTGCGGGTGACGCTGGACCTGGAAATCGAGGCGCTGGTCAAGGTCTACGAACTCGTCGTGACGCCCCAGTGGGACCGGATCGTCGAGGCCGTCGGCTCCGCGCCGGAGGTCCTCGTGGCCGGCTTCCAGATGATGGACGGCATAGCGTCGATCTTCGAGATCAGGCTTCAGCTGCTGCGACCGGGCGTGCGCCGGATCGACACCAGGAACGGAAGCCTGGCGGAGATCCACGATGCGCCGCGCGGCAGCGTCCTCATCCTGTTCGAGATGCGGCGCTATGGTGCGCTGAGCAAGAAGATTGCCCAGTCGGCCCGAGAGCATGGCCACTATGTCGTGATGATCTCCGACCCGCATTGCGGCTGGTCGAGCGACGTGTCCGACGACGTGCTCCTGGTGAGTACCGAAACGCGCCTTTTCTGGGATAGCCAGGCTGCCTTTCTGAGCCTCACGAACCTGCTGCTGGACGGGGTGGCGCAGAAGTTGAAGGGCAGCATCGCCACGCGGGCCAAGGCCCTCGACGCCATGGTGAACCAGTTCGGCCTGCTGACCTAG
PROTEIN sequence
Length: 293
VKKASENPASGEDSLQARLQRNVPLFTRAERALASYMLSNIERIPFETASSIADTVGTSKMTVSRFLRKNGYQGLAEVRRELRRKFAIGNYQVSNRVDRFLKAKSQDDKLRVTLDLEIEALVKVYELVVTPQWDRIVEAVGSAPEVLVAGFQMMDGIASIFEIRLQLLRPGVRRIDTRNGSLAEIHDAPRGSVLILFEMRRYGALSKKIAQSAREHGHYVVMISDPHCGWSSDVSDDVLLVSTETRLFWDSQAAFLSLTNLLLDGVAQKLKGSIATRAKALDAMVNQFGLLT*