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SCNpilot_cont_1000_bf_scaffold_60_curated_21

Organism: scnpilot_dereplicated_Mesorhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 22227..23450

Top 3 Functional Annotations

Value Algorithm Source
hemolysin D n=1 Tax=Rhizobium loti RepID=UPI00035FF92B similarity UNIREF
DB: UNIREF100
  • Identity: 76.0
  • Coverage: 450.0
  • Bit_score: 633
  • Evalue 1.60e-178
RND efflux membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 76.7
  • Coverage: 443.0
  • Bit_score: 633
  • Evalue 6.50e-179
  • rbh
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AID32822.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.0
  • Coverage: 454.0
  • Bit_score: 633
  • Evalue 2.20e-178

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Taxonomy

Mesorhizobium huakuii → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
TTGATCAAGCGTTTCATCATCGCCTTCATTTTGCTCGTGCTGGTGTGCGGCGGCATCGTCGGCTGGAACCTGTTCCGGGACAAGATGATCCAGCAGTACTTCGCCACCATGAAGCCGCCGGCGGCGACCGTGTCGACGGTCGTCGTCAAGCCGAGCAGCTGGACACCCGGTGTCGAGGCTATCGGCACGGTAAGGGCCGTGCGCGGTGTCGACCTCACGGTCGAGACCACCGGCATCGTCAAGGACATCGCTTTCCACGCAAACCAGAAGGTGGCGGCCAACGACGTCCTGCTGCAGCTCGACGACGCCGTCGAGCGCGCGGACCTGCAGGCCCAGAAGGCGCAGGCGGCCTCGGACCAGGCGGCCTTGACCCGCGCCGTGGAGTTGCAGAGGCGCGGCGTCGGCACCGACGCGACGCTCGACGCCGCTCGCGCCGCCGCCACCGCTTCGGCCTCTCAGGTGAACAAGCTGCAGGCCGTGCTTGACCAGAAGCAGCTTTCGGCCCCGTTCGCCGGCACGGTGGGCATCCCGAGAATCGATCTCGGACAGTATCTCGCGCCCGGCACGTCGGTGGTGACGTTGCAGGACCTCGACACCATGCGGGTCGACTTCTCCATTCCCGAACAGCAGCTTCCGCTGCTCAAGATCGGCCAGACCGTGCGTCTGGGCACCGGCGACGCCGACATGCCGTTCGCCGGCTCCGTGCGTGGCATCGACCCCAAGATCGATTCGAGCAGCCGTCTCGTCAACATCCGCGCCGAAGTCGCCAACCCGGACGGCAAGCTGACCCCCGGCCAGTTCGTGCAGGTGAGGGTCGAACTGCCTGAGCAGCAGAACGTGCTGACGCTGCCGCAGACCGCGCTGACCTCCAGCCTCTACGGCGACTACATCTTCGTCGTGCACCCCAAGGGCGATGCGGGCGCGGCGCCTGCCGCCAAGCCCGCCGACGCGGCCAAGCCCGACGACAAGGCAGCCGCCGATCCGGCAAAGCCGGCGGCGGACCCGGCAAAGCCCGCGGCCGAACAGCAGCCCGAGCTCGTGCTCTCGCAGGTATTCGTCAAGCCCGGACGTCGCAACGCCGGCATGGTTGAGATCCTGGACGGACTTGCCGCAGGCGACGAGGTCGTCACCGCCGGCCAGAACCGGCTCTTCAACGGCATGTCCGTCAACGTCGACAACACGATCGATCCGACCAAGTCGGCGAACAAGCAGGCTGCCCAGTAA
PROTEIN sequence
Length: 408
LIKRFIIAFILLVLVCGGIVGWNLFRDKMIQQYFATMKPPAATVSTVVVKPSSWTPGVEAIGTVRAVRGVDLTVETTGIVKDIAFHANQKVAANDVLLQLDDAVERADLQAQKAQAASDQAALTRAVELQRRGVGTDATLDAARAAATASASQVNKLQAVLDQKQLSAPFAGTVGIPRIDLGQYLAPGTSVVTLQDLDTMRVDFSIPEQQLPLLKIGQTVRLGTGDADMPFAGSVRGIDPKIDSSSRLVNIRAEVANPDGKLTPGQFVQVRVELPEQQNVLTLPQTALTSSLYGDYIFVVHPKGDAGAAPAAKPADAAKPDDKAAADPAKPAADPAKPAAEQQPELVLSQVFVKPGRRNAGMVEILDGLAAGDEVVTAGQNRLFNGMSVNVDNTIDPTKSANKQAAQ*