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SCNpilot_expt_1000_bf_scaffold_1171_curated

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1171_curated_1
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

102..794
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KR09_9MICO
Putative heme peroxidase {ECO:0000313|EMBL:KJL30372.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein; K09162 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1171_curated_2
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

791..1795
DNA (1005bp) protein (335aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
porphobilinogen deaminase; K01749 hydroxymethylbilane synthase [EC:2.5.1.61]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DE2D4C
SCNpilot_expt_1000_bf_scaffold_1171_curated_3
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1801..2613
DNA (813bp) protein (271aa)
uroporphyrinogen-III synthase; K13542 uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
Uroporphyrinogen III synthase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L698_9MICO
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:KJL24141.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
SCNpilot_expt_1000_bf_scaffold_1171_curated_4
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2610..3587
DNA (978bp) protein (326aa)
hemB; delta-aminolevulinic acid dehydratase; K01698 porphobilinogen synthase [EC:4.2.1.24]
delta-aminolevulinic acid dehydratase n=1 Tax=Microbacterium barkeri RepID=UPI0002F04697
Contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89167.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
SCNpilot_expt_1000_bf_scaffold_1171_curated_5
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3633..4952
DNA (1320bp) protein (440aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glutamate-1-semialdehyde aminotransferase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
glutamate-1-semialdehyde aminotransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003479E5D
SCNpilot_expt_1000_bf_scaffold_1171_curated_6
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5060..5506
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003614171
Uncharacterized protein {ECO:0000313|EMBL:KDA06775.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1171_curated_7
Sarcophilus harrisii, Sarcophilus, Dasyuromorphia, Mammalia, Chordata, Metazoa

Not on your lists

comp(5535..7013)
DNA (1479bp) protein (493aa)
Uncharacterized protein (Fragment) n=1 Tax=Sarcophilus harrisii RepID=G3VH31_SARHA
uncharacterized LOC100925999
Uncharacterized protein {ECO:0000313|Ensembl:ENSSHAP00000002485}; Flags: Fragment;; TaxID=9305 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus.;" source="Sarcophilus harrisii (Tasmanian devil) (Sarcophilus laniarius).;"
SCNpilot_expt_1000_bf_scaffold_1171_curated_8
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6979..8031)
DNA (1053bp) protein (351aa)
Putative ABC transporter ATP-binding protein YxlF {ECO:0000313|EMBL:KJL22028.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL22028.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L6A2_9MICO
multidrug ABC transporter ATPase; K09687 antibiotic transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_1171_curated_9
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8166..9224
DNA (1059bp) protein (353aa)
Putative enoyl-CoA hydratase echA8 {ECO:0000313|EMBL:KJL22287.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KJL22287.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
enoyl-CoA hydratase/carnithine racemase; K01692 enoyl-CoA hydratase [EC:4.2.1.17]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L4D2_9MICO
SCNpilot_expt_1000_bf_scaffold_1171_curated_10
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9470..10627)
DNA (1158bp) protein (386aa)
Uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CMI9_CLAM3
Glycosyltransferase {ECO:0000313|EMBL:AJW77926.1}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1171_curated_11
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10821..12548
DNA (1728bp) protein (576aa)
multidrug ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034880AB
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJL22025.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
multidrug ABC transporter ATPase/permease; K06147 ATP-binding cassette, subfamily B, bacterial
SCNpilot_expt_1000_bf_scaffold_1171_curated_12
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12566..14764
DNA (2199bp) protein (733aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D96B45
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJL34238.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
multidrug ABC transporter ATPase/permease; K06147 ATP-binding cassette, subfamily B, bacterial
SCNpilot_expt_1000_bf_scaffold_1171_curated_13
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14928..16967)
DNA (2040bp) protein (680aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034551C8
Uncharacterized protein {ECO:0000313|EMBL:EYT60327.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
D-alanyl-D-alanine carboxypeptidase
SCNpilot_expt_1000_bf_scaffold_1171_curated_14
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17058..17696
DNA (639bp) protein (213aa)
membrane protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003737BEF
Putative HMP/thiamine permease protein YkoE {ECO:0000313|EMBL:KJL34236.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1171_curated_15
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17699..19171
DNA (1473bp) protein (491aa)
Putative HMP/thiamine import ATP-binding protein YkoD {ECO:0000313|EMBL:KJQ55209.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJQ55209.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L4D7_9MICO
cobalt ABC transporter ATPase; K02006 cobalt/nickel transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_1171_curated_16
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19168..19977
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036477AB
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000313|EMBL:KJQ55208.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
cobalt ABC transporter permease; K02008 cobalt/nickel transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1171_curated_17
unknown

Not on your lists

20267..20671
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1171_curated_18
unknown

Not on your lists

20671..20937
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1171_curated_19
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21185..21919)
DNA (735bp) protein (245aa)
Aminoglycoside 3'-phosphotransferase {ECO:0000313|EMBL:KJQ55207.1}; EC=2.7.1.95 {ECO:0000313|EMBL:KJQ55207.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
aminoglycoside phosphotransferase; K00897 aminoglycoside 3'-phosphotransferase [EC:2.7.1.95]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030FE04C
SCNpilot_expt_1000_bf_scaffold_1171_curated_20
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21945..23048)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N9P7_MICTS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ74516.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_1000_bf_scaffold_1171_curated_21
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23065..23427)
DNA (363bp) protein (121aa)
uroporphyrin-III C-methyltransferase n=1 Tax=Nesterenkonia sp. F RepID=UPI000255CFFE
Uncharacterized protein {ECO:0000313|EMBL:KDA06769.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1171_curated_22
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24284..25114
DNA (831bp) protein (277aa)
short-chain dehydrogenase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003462BDE
Contig_30, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89177.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
dehydrogenase with different specificities; K13775 citronellol/citronellal dehydrogenase
SCNpilot_expt_1000_bf_scaffold_1171_curated_23
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25278..27155
DNA (1878bp) protein (626aa)
alpha-amylase; K01187 alpha-glucosidase [EC:3.2.1.20]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037418BD
Alpha amylase catalytic region {ECO:0000313|EMBL:EIC07118.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
SCNpilot_expt_1000_bf_scaffold_1171_curated_24
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27171..28184)
DNA (1014bp) protein (338aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000369E7B5
LacI family transcriptional regulator {ECO:0000313|EMBL:ELQ81379.1}; TaxID=1265868 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
LacI family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1171_curated_25
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28218..29132)
DNA (915bp) protein (305aa)
maltooligosaccharides ABC transporter inner membrane subunit (EC:3.6.3.-)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003783DC2
Maltose transport system permease protein MalG {ECO:0000313|EMBL:EAR24687.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
SCNpilot_expt_1000_bf_scaffold_1171_curated_26
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29132..30787)
DNA (1656bp) protein (552aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036771AF
Maltose transport system permease protein MalF {ECO:0000313|EMBL:EAR24686.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
binding-protein-dependent transport system inner membrane protein; K10109 maltose/maltodextrin transport system permease protein
SCNpilot_expt_1000_bf_scaffold_1171_curated_27
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30861..32108)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035F6C14
Putative periplasmic maltose-binding protein {ECO:0000313|EMBL:EAR24685.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
family 1 extracellular solute-binding protein
SCNpilot_expt_1000_bf_scaffold_1171_curated_28
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32231..33055)
DNA (825bp) protein (275aa)
Aminoglycoside N(3')-acetyltransferase (EC:2.3.1.81); K00662 aminoglycoside N3'-acetyltransferase [EC:2.3.1.81]
Aminoglycoside N(3')-acetyltransferase {ECO:0000313|EMBL:AEE46437.1}; EC=2.3.1.81 {ECO:0000313|EMBL:AEE46437.1};; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
aminoglycoside N(3'''')-acetyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003643BC3
SCNpilot_expt_1000_bf_scaffold_1171_curated_29
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33122..33853)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L4E7_9MICO
Sulfite exporter TauE/SafE {ECO:0000313|EMBL:KJQ55204.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein; K07090
SCNpilot_expt_1000_bf_scaffold_1171_curated_30
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33976..34614)
DNA (639bp) protein (213aa)
2-dehydro-3-deoxyphosphogluconate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030751AA
2-dehydro-3-deoxyphosphogluconate aldolase {ECO:0000313|EMBL:KDA06766.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
Displaying items 1-30 of 81 in total

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