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SCNpilot_expt_1000_bf_scaffold_833_curated

Search features with annotation key words

Displaying items 31-60 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_833_curated_31
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(26447..27367)
DNA (921bp) protein (307aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rlu; pseudouridylate synthase, 23S RNA-specific; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
RNA pseudouridine synthase n=1 Tax=Microbacterium barkeri RepID=UPI0002F1F526
SCNpilot_expt_1000_bf_scaffold_833_curated_32
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27370..27873)
DNA (504bp) protein (168aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36]
Lipoprotein signal peptidase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBQ1_9MICO
SCNpilot_expt_1000_bf_scaffold_833_curated_33
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27947..28522)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EA09BD
Cell division protein {ECO:0000313|EMBL:EYT58875.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
cell division initiation protein
SCNpilot_expt_1000_bf_scaffold_833_curated_34
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28671..28967)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D4C40
YGGT family protein {ECO:0000313|EMBL:KJL27561.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
integral membrane protein; K02221 YggT family protein
SCNpilot_expt_1000_bf_scaffold_833_curated_35
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(28970..29431)
DNA (462bp) protein (154aa)
cell division protein SepF n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003448DFE
hypothetical protein; K09772 cell division inhibitor SepF
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_833_curated_36
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29476..30156)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E62571
Contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIP93401.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein; K06997
SCNpilot_expt_1000_bf_scaffold_833_curated_37
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(30153..31298)
DNA (1146bp) protein (382aa)
cell division protein FtsZ n=1 Tax=Microbacterium barkeri RepID=UPI000307E8BE
ftsZ; cell division GTPase; K03531 cell division protein FtsZ
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_833_curated_38
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31474..32451)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMX7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM80547.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
cell division septal protein; K03589 cell division protein FtsQ
SCNpilot_expt_1000_bf_scaffold_833_curated_39
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32455..33855)
DNA (1401bp) protein (467aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
murC; UDP-N-acetylmuramate-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
UDP-N-acetylmuramate--alanine ligase n=1 Tax=Microbacterium barkeri RepID=UPI0002E64E30
SCNpilot_expt_1000_bf_scaffold_833_curated_40
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33868..34941)
DNA (1074bp) protein (358aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0002DB213B
SCNpilot_expt_1000_bf_scaffold_833_curated_41
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(34938..36299)
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000360BB95
bacterial cell division membrane protein; K03588 cell division protein FtsW
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_833_curated_42
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(36268..37803)
DNA (1536bp) protein (512aa)
murD; UDP-N-acetylmuramoylalanine-D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D891F
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_833_curated_43
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37808..38902)
DNA (1095bp) protein (365aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Microbacterium barkeri RepID=UPI000373F76F
SCNpilot_expt_1000_bf_scaffold_833_curated_44
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38914..40326)
DNA (1413bp) protein (471aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
murF; UDP-N-acetylmuramyl pentapeptide synthase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KQ51_9MICO
SCNpilot_expt_1000_bf_scaffold_833_curated_45
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(40357..42141)
DNA (1785bp) protein (595aa)
cell division protein FtsI/penicillin-binding protein 2; K03587 cell division protein FtsI (penicillin-binding protein 3) [EC:2.4.1.129]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KS27_9MICO
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_833_curated_46
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42163..42789)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003466AB7
Cell division protein FtsL {ECO:0000313|EMBL:KJL27549.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_833_curated_47
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(42786..43724)
DNA (939bp) protein (313aa)
mraW; S-adenosylmethionine-dependent methyltransferase; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KC14_9MICO
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_833_curated_48
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43823..44299)
DNA (477bp) protein (159aa)
Protein MraZ n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMW8_9MICO
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein; K03925 MraZ protein
SCNpilot_expt_1000_bf_scaffold_833_curated_49
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44523..44912)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KQ47_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KDA06336.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_833_curated_50
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

45009..46085
DNA (1077bp) protein (359aa)
geranylgeranyl pyrophosphate synthase; K13787 geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003720728
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_833_curated_51
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46135..46479)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KM58_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM80534.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_833_curated_52
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

46613..47818
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KC09_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM80533.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
peptidoglycan-binding protein
SCNpilot_expt_1000_bf_scaffold_833_curated_53
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

47985..49847
DNA (1863bp) protein (621aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003450461
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_833_curated_54
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49972..51243)
DNA (1272bp) protein (424aa)
aro; 2-dehydro-3-deoxyphosphooctonate aldolase; K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] rbh
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KQ41_9MICO
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:EYT58854.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
SCNpilot_expt_1000_bf_scaffold_833_curated_55
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51300..52025)
DNA (726bp) protein (242aa)
plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI00037FEEE7
Contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIP93404.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
SCNpilot_expt_1000_bf_scaffold_833_curated_56
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52113..53939
DNA (1827bp) protein (609aa)
fadD; long-chain acyl-CoA synthetase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
Long-chain fatty acid--CoA ligase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KM54_9MICO
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:EQM80529.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
SCNpilot_expt_1000_bf_scaffold_833_curated_57
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54004..54495)
DNA (492bp) protein (164aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
N-formylmethionyl-tRNA deformylase; K01462 peptide deformylase [EC:3.5.1.88]
peptide deformylase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034759BB
SCNpilot_expt_1000_bf_scaffold_833_curated_58
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54495..56723)
DNA (2229bp) protein (743aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMV9_9MICO
Contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIP93345.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
ATPase
SCNpilot_expt_1000_bf_scaffold_833_curated_59
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56769..60176)
DNA (3408bp) protein (1136aa)
pycA; pyruvate carboxylase; K01958 pyruvate carboxylase [EC:6.4.1.1]
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Pyruvate carboxylase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N867_MICTS
SCNpilot_expt_1000_bf_scaffold_833_curated_60
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

60337..61149
DNA (813bp) protein (271aa)
chromosome partitioning ATPase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000375A6D8
Chromosome partitioning protein ParA {ECO:0000313|EMBL:KJL27535.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
parA; ATPase
Displaying items 31-60 of 101 in total

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