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SCNpilot_expt_1000_bf_scaffold_833_curated_57

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(54004..54495)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 163.0
  • Bit_score: 286
  • Evalue 2.00e-74
N-formylmethionyl-tRNA deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 163.0
  • Bit_score: 264
  • Evalue 1.90e-68
peptide deformylase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034759BB similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 163.0
  • Bit_score: 286
  • Evalue 1.50e-74

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Taxonomy

Microbacterium sp. UCD-TDU → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGGCCGTCCGCGAGATCCGCCTGTACGGCGACCCCGTGCTGCGCCAGGTGTGCGCCCCGATCGAGCAGATCGACGACGGCGTGCGCGCTCTGATCGCCGACCTCGTCGACACCGTCGAGCTGCCCGGCCGGGCAGGCGTCGCCGCGAACCAGATCGGTGTCGCGCTGCGTGCGTTCAGCTACAACATCGACGGCGACATCGGCTACGTCATCAACCCCGTGCTGGTCGAGGTGCGCGGCGAGGCTGTCGAGATCGGCGAGGGATGCCTGTCGGTGCCCGGCCTGTGGCACGACACGCCGCGTCACCCGTGGGCTCGGGTCGAGGGCATCGACCTCGACGGCAACCCGGTCGTGCTGGAAGGCGAGGGGCTGCTCGCGCAGGCCCTGCAGCACGAGACCGACCACCTGGACGGCATGGTGTACCTGGGCAGGCTCCAGGGGGAGACCAGGAAGACCGCGATGCGGCAGGTGCGCGAGAGCGACTGGTTCTGA
PROTEIN sequence
Length: 164
MAVREIRLYGDPVLRQVCAPIEQIDDGVRALIADLVDTVELPGRAGVAANQIGVALRAFSYNIDGDIGYVINPVLVEVRGEAVEIGEGCLSVPGLWHDTPRHPWARVEGIDLDGNPVVLEGEGLLAQALQHETDHLDGMVYLGRLQGETRKTAMRQVRESDWF*