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SCNpilot_expt_1000_bf_scaffold_896_curated

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_896_curated_1
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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332..682
DNA (351bp) protein (117aa)
glyoxalase n=1 Tax=Gordonia polyisoprenivorans RepID=UPI00037DFEB2
Glyoxalase {ECO:0000313|EMBL:AHC27285.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
glyoxalase-like domain-containing protein
SCNpilot_expt_1000_bf_scaffold_896_curated_2
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

732..1211
DNA (480bp) protein (160aa)
molybdenum cofactor synthesis protein n=1 Tax=Humibacter albus RepID=UPI0003B37ADB
Molybdopterin biosynthesis enzyme {ECO:0000313|EMBL:GAD33654.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
molybdopterin biosynthesis enzyme
SCNpilot_expt_1000_bf_scaffold_896_curated_3
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1208..1633
DNA (426bp) protein (142aa)
Molybdopterin synthase catalytic subunit 2 {ECO:0000313|EMBL:CDK00589.1}; EC=2.-.-.- {ECO:0000313|EMBL:CDK00589.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
molybdopterin converting factor, large subunit; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-]
molybdopterin synthase n=1 Tax=Humibacter albus RepID=UPI0003B39D3B
SCNpilot_expt_1000_bf_scaffold_896_curated_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1804..2037)
DNA (234bp) protein (78aa)
molybdopterin converting factor n=1 Tax=Humibacter albus RepID=UPI0003B6C1FC
Thiamine S protein {ECO:0000313|EMBL:EIC07726.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_896_curated_5
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2039..2299)
DNA (261bp) protein (87aa)
molybdopterin-guanine dinucleotide biosynthesis protein MobA n=1 Tax=Humibacter albus RepID=UPI0003B75066
Molybdopterin-guanine dinucleotide biosynthesis protein MobA {ECO:0000313|EMBL:KHK98933.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
molybdopterin-guanine dinucleotide biosynthesis protein A
SCNpilot_expt_1000_bf_scaffold_896_curated_6
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2296..2901)
DNA (606bp) protein (202aa)
molybdopterin-guanine dinucleotide biosynthesis protein n=1 Tax=Humibacter albus RepID=UPI0003B46898
Uncharacterized protein {ECO:0000313|EMBL:KHK98932.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
molybdopterin-guanine dinucleotide biosynthesis protein A
SCNpilot_expt_1000_bf_scaffold_896_curated_7
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2904..3383)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000360E670
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
moaC; molybdenum cofactor biosynthesis enzyme; K03637 molybdenum cofactor biosynthesis protein C
SCNpilot_expt_1000_bf_scaffold_896_curated_8
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3380..4600)
DNA (1221bp) protein (407aa)
Molybdopterin molybdenumtransferase {ECO:0000313|EMBL:KJL27066.1}; EC=2.10.1.1 {ECO:0000313|EMBL:KJL27066.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
molybdopterin biosynthesis enzyme; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
molybdopterin biosynthesis protein n=1 Tax=Humibacter albus RepID=UPI0003B691AE
SCNpilot_expt_1000_bf_scaffold_896_curated_9
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4597..5673)
DNA (1077bp) protein (359aa)
Putative adenylyltransferase/sulfurtransferase MoeZ {ECO:0000313|EMBL:CDK00107.1}; EC=2.7.7.- {ECO:0000313|EMBL:CDK00107.1};; EC=2.8.1.- {ECO:0000313|EMBL:CDK00107.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
thiamine biosynthesis protein ThiF n=1 Tax=Humibacter albus RepID=UPI0003B51ADA
dinucleotide-utilizing enzyme; K11996 adenylyltransferase and sulfurtransferase
SCNpilot_expt_1000_bf_scaffold_896_curated_10
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5769..6161
DNA (393bp) protein (131aa)
MerR family transcriptional regulator n=1 Tax=Microbacterium sp. 292MF RepID=UPI00038267DD
MerR family transcriptional regulator {ECO:0000313|EMBL:KIC60293.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
N-terminal domain of molybdenum-binding protein
SCNpilot_expt_1000_bf_scaffold_896_curated_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6189..7034
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003723B3C
Molybdate-binding periplasmic protein {ECO:0000313|EMBL:KJL36812.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
molybdate ABC transporter periplasmic protein; K02020 molybdate transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_896_curated_12
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7034..7864
DNA (831bp) protein (277aa)
Molybdate ABC transporter permease n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KQU3_9MICO
Sulfate transport system permease protein CysW {ECO:0000313|EMBL:KJL31138.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
modB; molybdate ABC transporter permease; K02018 molybdate transport system permease protein
SCNpilot_expt_1000_bf_scaffold_896_curated_13
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7861..8769
DNA (909bp) protein (303aa)
sugar ABC transporter ATPase; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29]
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031DEF4F
ABC transporter related protein {ECO:0000313|EMBL:CDK01956.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
SCNpilot_expt_1000_bf_scaffold_896_curated_14
Tsukamurella paurometabola, Tsukamurella, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8846..9760
DNA (915bp) protein (305aa)
Protein FdhD homolog n=1 Tax=Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) RepID=D5UQI2_TSUPD
formate dehydrogenase family accessory protein FdhD; K02379 FdhD protein
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=521096 species="Bacteria; Actinobacteria; Corynebacteriales; Tsukamurellaceae; Tsukamurella.;" source="Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 /; NBRC 16120 / NCTC 13040) (Corynebacterium paurometabolum).;"
SCNpilot_expt_1000_bf_scaffold_896_curated_15
Arthrobacter gangotriensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9825..12125
DNA (2301bp) protein (767aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B32DFA
Dehydrogenase alpha (Molybdopterin) subunit {ECO:0000313|EMBL:EMQ96664.1}; TaxID=1276920 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter gangotriensis Lz1y.;"
oxidoreductase alpha (molybdopterin) subunit
SCNpilot_expt_1000_bf_scaffold_896_curated_16
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12181..13209
DNA (1029bp) protein (343aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
molybdenum cofactor biosynthesis protein MoeA n=1 Tax=Humibacter albus RepID=UPI0003B5E1A9
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein
SCNpilot_expt_1000_bf_scaffold_896_curated_17
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13206..14330
DNA (1125bp) protein (375aa)
Beta-phosphoglucomutase {ECO:0000313|EMBL:KJL35131.1}; EC=5.4.2.6 {ECO:0000313|EMBL:KJL35131.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DE09C
phosphatase/phosphohexomutase
SCNpilot_expt_1000_bf_scaffold_896_curated_18
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14397..16889
DNA (2493bp) protein (831aa)
Alpha,alpha-trehalose phosphorylase {ECO:0000313|EMBL:KJQ55373.1}; EC=2.4.1.64 {ECO:0000313|EMBL:KJQ55373.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Kojibiose phosphorylase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDI2_9MICO
trehalose and maltose hydrolase
SCNpilot_expt_1000_bf_scaffold_896_curated_19
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16892..17956
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B3E441
Contig_13, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92441.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
SCNpilot_expt_1000_bf_scaffold_896_curated_20
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17998..20613
DNA (2616bp) protein (872aa)
DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 PF9_9MICO">RepID=T5KPF9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM81662.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
SCNpilot_expt_1000_bf_scaffold_896_curated_21
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20613..21206
DNA (594bp) protein (198aa)
recombinase RecR n=1 Tax=Microbacterium barkeri RepID=UPI0002F4ED42
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
recR; recombinational DNA repair protein; K06187 recombination protein RecR
SCNpilot_expt_1000_bf_scaffold_896_curated_22
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21203..22126
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344DBB5
Contig_13, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92444.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_896_curated_23
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22214..23500
DNA (1287bp) protein (429aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
lysC; aspartokinase; K00928 aspartate kinase [EC:2.7.2.4]
aspartokinase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00035E7746
SCNpilot_expt_1000_bf_scaffold_896_curated_24
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23541..24023
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI0003790656
Leucobacter komagatae strain VKM ST2845 L_komagatae_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIP52341.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
putative acetyltransferase
SCNpilot_expt_1000_bf_scaffold_896_curated_25
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24163..25236
DNA (1074bp) protein (358aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121, ECO:0000256|RuleBase:RU004501};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
asd; aspartate-semialdehyde dehydrogenase; K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
Aspartate-semialdehyde dehydrogenase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDH7_9MICO
SCNpilot_expt_1000_bf_scaffold_896_curated_26
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25326..25916
DNA (591bp) protein (197aa)
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000256|HAMAP-Rule:MF_00212}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
mqoA; dehydrogenase; K00116 malate dehydrogenase (quinone) [EC:1.1.5.4]
Probable malate:quinone oxidoreductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E648_9MICO
SCNpilot_expt_1000_bf_scaffold_896_curated_27
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25856..26719
DNA (864bp) protein (288aa)
Probable malate:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00212}; EC=1.1.5.4 {ECO:0000256|HAMAP-Rule:MF_00212};; MQO {ECO:0000256|HAMAP-Rule:MF_00212}; Malate dehydrogenase [quinone] {ECO:0000256|HAMAP-Rule:MF_00212}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
mqoA; dehydrogenase; K00116 malate dehydrogenase (quinone) [EC:1.1.5.4]
Probable malate:quinone oxidoreductase n=1 Tax=Microbacterium maritypicum MF109 PF3_9MICO">RepID=T5KPF3_9MICO
SCNpilot_expt_1000_bf_scaffold_896_curated_28
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26730..27359
DNA (630bp) protein (210aa)
Thymidine kinase {ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|RuleBase:RU000544};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
tdk; thymidine kinase; K00857 thymidine kinase [EC:2.7.1.21]
thymidine kinase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003471F8D
SCNpilot_expt_1000_bf_scaffold_896_curated_29
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27419..28114
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KRM9_9MICO
GntR family transcriptional regulator {ECO:0000313|EMBL:KDA06132.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_896_curated_30
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28140..29399
DNA (1260bp) protein (420aa)
(S)-mandelate dehydrogenase {ECO:0000313|EMBL:KJQ55364.1}; EC=1.1.99.31 {ECO:0000313|EMBL:KJQ55364.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
L-lactate dehydrogenase; K00101 L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
lactate dehydrogenase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347112B
Displaying items 1-30 of 40 in total

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