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SCNpilot_expt_1000_bf_scaffold_1096_curated

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1096_curated_1
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20..1786)
DNA (1767bp) protein (589aa)
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:KJL34172.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL34172.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
monosaccharide-transporting ATPase (EC:3.6.3.17); K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00034CFBFE
SCNpilot_expt_1000_bf_scaffold_1096_curated_2
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1783..2850)
DNA (1068bp) protein (356aa)
peptide ABC transporter permease n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A517
Glutathione transport system permease protein GsiD {ECO:0000313|EMBL:KJL34171.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ABC transporter permease
SCNpilot_expt_1000_bf_scaffold_1096_curated_3
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2852..3928)
DNA (1077bp) protein (359aa)
peptide ABC transporter permease n=1 Tax=Leucobacter salsicius RepID=UPI000347806E
Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:KJL24658.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
dppB; ABC transporter permease; K02033 peptide/nickel transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_1096_curated_4
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4015..5643)
DNA (1629bp) protein (543aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A07EE
Putative D,D-dipeptide-binding periplasmic protein DdpA {ECO:0000313|EMBL:KJL24659.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ABC transporter solute-binding protein
SCNpilot_expt_1000_bf_scaffold_1096_curated_5
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5789..7207)
DNA (1419bp) protein (473aa)
Poly(A) polymerase I {ECO:0000313|EMBL:KJL22843.1}; EC=2.7.7.19 {ECO:0000313|EMBL:KJL22843.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
pcnB; tRNA nucleotidyltransferase/poly(A) polymerase; K00970 poly(A) polymerase [EC:2.7.7.19]
RNA nucleotidyltransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00035E9F63
SCNpilot_expt_1000_bf_scaffold_1096_curated_6
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7287..7955)
DNA (669bp) protein (223aa)
Transcriptional regulator n=1 Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V7C5_9PSEU
Transcriptional regulator {ECO:0000313|EMBL:EWS80980.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresistens.;"
TetR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1096_curated_7
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7965..9287
DNA (1323bp) protein (441aa)
FAD-binding monooxygenase n=1 Tax=Glaciibacter superstes RepID=UPI0003B4C113
FAD-binding monooxygenase {ECO:0000313|EMBL:EWS80979.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresistens.;"
FAD-binding monooxygenase
SCNpilot_expt_1000_bf_scaffold_1096_curated_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9326..12514)
DNA (3189bp) protein (1063aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BB08_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85769.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
metallophosphoesterase
SCNpilot_expt_1000_bf_scaffold_1096_curated_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12511..14208)
DNA (1698bp) protein (566aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9H0_9MICO
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EIC06437.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
metallophosphoesterase
SCNpilot_expt_1000_bf_scaffold_1096_curated_10
unknown

Not on your lists

comp(14457..14579)
DNA (123bp) protein (41aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1096_curated_11
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14744..15802)
DNA (1059bp) protein (353aa)
Limonene 1,2-monooxygenase {ECO:0000313|EMBL:KJL25120.1}; EC=1.14.13.107 {ECO:0000313|EMBL:KJL25120.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
limonene 1,2-monooxygenase (EC:1.14.13.107)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D4EE86
SCNpilot_expt_1000_bf_scaffold_1096_curated_12
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15848..16321)
DNA (474bp) protein (158aa)
Uncharacterized protein {ECO:0000313|EMBL:CDK01174.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
SCNpilot_expt_1000_bf_scaffold_1096_curated_13
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16433..17959)
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D6F410
Contig_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89035.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
methylase of polypeptide chain release factors
SCNpilot_expt_1000_bf_scaffold_1096_curated_14
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18048..20180
DNA (2133bp) protein (711aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FC8B34
Uncharacterized protein {ECO:0000313|EMBL:KDA05125.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component
SCNpilot_expt_1000_bf_scaffold_1096_curated_15
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20177..21799
DNA (1623bp) protein (541aa)
integral membrane protein MviN n=1 Tax=Microbacterium sp. B19 RepID=UPI000348AE30
Putative peptidoglycan biosynthesis protein MviN {ECO:0000313|EMBL:KJL21718.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein, virulence factor; K03980 virulence factor
SCNpilot_expt_1000_bf_scaffold_1096_curated_16
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21927..22883
DNA (957bp) protein (319aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
trxB; thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
thioredoxin reductase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003465085
SCNpilot_expt_1000_bf_scaffold_1096_curated_17
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22943..23266
DNA (324bp) protein (108aa)
Thioredoxin n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDY3_9MICO
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
trxA; thiol-disulfide isomerase and thioredoxins; K03671 thioredoxin 1
SCNpilot_expt_1000_bf_scaffold_1096_curated_18
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23371..23547)
DNA (177bp) protein (59aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CF085
Dephospho-CoA kinase/protein folding accessory domain-containing protein {ECO:0000313|EMBL:KJL29977.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
SCNpilot_expt_1000_bf_scaffold_1096_curated_19
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23602..23934)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KB58_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL29978.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
tryptophan synthase alpha chain
SCNpilot_expt_1000_bf_scaffold_1096_curated_20
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24004..24561)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2X372_9NOCA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EME18238.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
SCNpilot_expt_1000_bf_scaffold_1096_curated_21
Streptomyces nodosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24592..25080)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Rhodococcus qingshengii BKS 20-40 RepID=M2VES3_9NOCA
Chromosome partitioning protein ParB {ECO:0000313|EMBL:AJE43407.1}; TaxID=40318 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces nodosus.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1096_curated_22
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25344..26312)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FB9CBD
Contig_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89016.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
parB; transcriptional regulator; K03497 chromosome partitioning protein, ParB family
SCNpilot_expt_1000_bf_scaffold_1096_curated_23
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26312..27244)
DNA (933bp) protein (311aa)
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:KJL21725.1}; EC=3.6.-.- {ECO:0000313|EMBL:KJL21725.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
Chromosome partitioning protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDX8_9MICO
parA; ATPase; K03496 chromosome partitioning protein
SCNpilot_expt_1000_bf_scaffold_1096_curated_24
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27455..27658)
DNA (204bp) protein (68aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1C2_9MICO
GIY-YIG nuclease superfamily protein {ECO:0000313|EMBL:KJQ53732.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
excinuclease ABC subunit C domain-containing protein; K07461 putative endonuclease
SCNpilot_expt_1000_bf_scaffold_1096_curated_25
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27987..28610)
DNA (624bp) protein (208aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
gidB; S-adenosylmethionine-dependent methyltransferase; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DEDA2
SCNpilot_expt_1000_bf_scaffold_1096_curated_26
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28772..29266)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349E185
DNA-binding protein {ECO:0000313|EMBL:EYT60659.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
RNA-binding protein; K06346 spoIIIJ-associated protein
SCNpilot_expt_1000_bf_scaffold_1096_curated_27
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29266..30342)
DNA (1077bp) protein (359aa)
Preprotein translocase subunit YidC n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K1I4_9MICO
Membrane protein insertase MisCA {ECO:0000313|EMBL:KJL25132.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
preprotein translocase subunit YidC; K03217 preprotein translocase subunit YidC
SCNpilot_expt_1000_bf_scaffold_1096_curated_28
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(30346..30696)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003475C74
hypothetical protein; K08998 hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_1096_curated_29
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(30693..31043)
DNA (351bp) protein (117aa)
RNase P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5]
Ribonuclease P protein component n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDX3_9MICO
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_1096_curated_30
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(31065..31202)
DNA (138bp) protein (46aa)
Ribosomal protein L34 n=1 Tax=Microbacterium sp. TS-1 RepID=U2XNR0_9MICO
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rpmH; ribosomal protein L34; K02914 large subunit ribosomal protein L34
Displaying items 1-30 of 50 in total

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