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SCNpilot_expt_1000_bf_scaffold_544_curated_23

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 21782..22528

Top 3 Functional Annotations

Value Algorithm Source
3-dehydroshikimate dehydratase {ECO:0000313|EMBL:KJQ55699.1}; EC=4.2.1.118 {ECO:0000313|EMBL:KJQ55699.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 252.0
  • Bit_score: 325
  • Evalue 7.90e-86
Xylose isomerase domain-containing protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I066_9PSEU similarity UNIREF
DB: UNIREF100
  • Identity: 53.0
  • Coverage: 249.0
  • Bit_score: 249
  • Evalue 3.90e-63
sugar phosphate isomerase/epimerase similarity KEGG
DB: KEGG
  • Identity: 46.6
  • Coverage: 253.0
  • Bit_score: 224
  • Evalue 4.20e-56

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Taxonomy

Microbacterium sp. SA39 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGCGACCAGGGCTCTGCTCGGTGACGTTCCGGCAGCTCGCGCCGGAGGAGATCGTTGCGCTCGCCGCGGAGGCGCAGCTCGAGGTGATCGAGTGGGGCGGCGATGTGCACGTGCCGCCCGGCGACGTCGAACGCGCAGCGCAGGTCGCCCGGGCGACGACGGACGGCGGTCTCGCGGTCTGCTCGTACGGCTCGTACTTCCGTGCCGGCGCCGACGAGGCGCTCACCCCGATCCTCGACAGCGCCGAGGCGCTCGGCGCTGATCGCGTGCGGATCTGGGCGGGGCACGTGGACTCCGCGGATGCTTCTCCCGCGCAGTACGCGCAGATCGTCGCGCGGCTGAGGGATGCTGCGGCCGAGGCGTCCGAGCGGCGGGTCGGCCTCGCGCTGGAGTATCACCGCGGCACGATCGCCGACAACCCGGATGCCGTGCTGCGCCTGCTCGCCGACGTGCCGGCCCTGTCCACGTACTGGCAGCCCTCGGTCGACGCCCCGGACGCGACGGCCCTCGCCGAGTTCGACGCGATCGCCGCGCACACGAGCGCCGTGCACGTCTTCTCGTGGTGGCCGTTCAACGAGCGCCTGCGCCTGCACGAGCGGCAGGGGATGTGGCAGTCGCTGTGCGCTGCGGCATCCGCTCTGCCGGTCCCGCCTCGCGACGCCCTGCTCGAGTTCGTGCCCGGTGACGATCCGGCGCTGCTCGCGCCCGAGGCCGAGACCCTGCGGGGCTGGCTGGCCCGCGCCTGA
PROTEIN sequence
Length: 249
MRPGLCSVTFRQLAPEEIVALAAEAQLEVIEWGGDVHVPPGDVERAAQVARATTDGGLAVCSYGSYFRAGADEALTPILDSAEALGADRVRIWAGHVDSADASPAQYAQIVARLRDAAAEASERRVGLALEYHRGTIADNPDAVLRLLADVPALSTYWQPSVDAPDATALAEFDAIAAHTSAVHVFSWWPFNERLRLHERQGMWQSLCAAASALPVPPRDALLEFVPGDDPALLAPEAETLRGWLARA*