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SCNpilot_expt_1000_bf_scaffold_544_curated

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Displaying items 1-30 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_544_curated_1
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(267..431)
DNA (165bp) protein (55aa)
Taurine--pyruvate aminotransferase {ECO:0000313|EMBL:KJL33673.1}; EC=2.6.1.77 {ECO:0000313|EMBL:KJL33673.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B786BC
SCNpilot_expt_1000_bf_scaffold_544_curated_2
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

474..1115
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B7B0E6
Purine catabolism regulatory protein-like family protein {ECO:0000313|EMBL:KJL33671.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
regulator of polyketide synthase expression; K09684 purine catabolism regulatory protein
SCNpilot_expt_1000_bf_scaffold_544_curated_3
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1254..1787)
DNA (534bp) protein (178aa)
adenylattransferase (EC:2.3.1.1)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034AC10F
Uncharacterized protein {ECO:0000313|EMBL:EYT60241.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
SCNpilot_expt_1000_bf_scaffold_544_curated_4
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1794..2771)
DNA (978bp) protein (326aa)
galE1; UDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2]
UDP-glucose 4-epimerase (Fragment) n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KG32_9MICO
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EQM76117.1}; Flags: Fragment;; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
SCNpilot_expt_1000_bf_scaffold_544_curated_5
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2836..4017)
DNA (1182bp) protein (394aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:MF_00246}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
galactokinase; K00849 galactokinase [EC:2.7.1.6]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347A94B
SCNpilot_expt_1000_bf_scaffold_544_curated_6
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4131..5309)
DNA (1179bp) protein (393aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU000506}; EC=2.7.7.12 {ECO:0000256|RuleBase:RU000506};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
Galactose-1-phosphate uridylyltransferase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KGW5_9MICO
SCNpilot_expt_1000_bf_scaffold_544_curated_7
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5389..6354
DNA (966bp) protein (322aa)
Transcriptional regulator n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDY9_MICTS
Lactose operon repressor {ECO:0000313|EMBL:KJL34710.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_544_curated_8
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6363..7385)
DNA (1023bp) protein (341aa)
IMP dehydrogenase n=1 Tax=Nocardiopsis sp. CNS639 RepID=UPI00035CABFE
Contig_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92160.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
zinc-binding dehydrogenase family protein
SCNpilot_expt_1000_bf_scaffold_544_curated_9
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7559..9493
DNA (1935bp) protein (645aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036779FF
Uncharacterized protein {ECO:0000313|EMBL:KJL23079.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_544_curated_10
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9542..10078
DNA (537bp) protein (179aa)
Sugar ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YLP3_9MICO
Sugar ABC transporter permease protein {ECO:0000313|EMBL:GAD33929.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein
SCNpilot_expt_1000_bf_scaffold_544_curated_11
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10082..10762
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YTD8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL23083.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
flavodoxin reductase (ferredoxin-NADPH reductase) family 1
SCNpilot_expt_1000_bf_scaffold_544_curated_12
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10791..11807)
DNA (1017bp) protein (339aa)
Glycerate dehydrogenase {ECO:0000313|EMBL:KJL19815.1}; EC=1.1.1.29 {ECO:0000313|EMBL:KJL19815.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000302E7F4
phosphoglycerate dehydrogenase-like oxidoreductase
SCNpilot_expt_1000_bf_scaffold_544_curated_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11952..13799
DNA (1848bp) protein (616aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E38AE9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ75052.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_expt_1000_bf_scaffold_544_curated_14
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13796..14896
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E32ECC
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:ERK69505.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
regulatory protein DeoR
SCNpilot_expt_1000_bf_scaffold_544_curated_15
Brachybacterium muris, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14904..15296)
DNA (393bp) protein (131aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1249481 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium muris UCD-AY4.;"
twitching motility protein PilT n=1 Tax=Glaciibacter superstes RepID=UPI0003B5B405
PilT protein domain-containing protein
SCNpilot_expt_1000_bf_scaffold_544_curated_16
Brachybacterium muris, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15299..15571)
DNA (273bp) protein (91aa)
toxin-antitoxin system antitoxin subunit n=1 Tax=Glaciibacter superstes RepID=UPI0003B71B61
Antitoxin {ECO:0000313|EMBL:EYT48941.1}; TaxID=1249481 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium muris UCD-AY4.;"
Phd multi-domain protein
SCNpilot_expt_1000_bf_scaffold_544_curated_17
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15691..17412
DNA (1722bp) protein (574aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KH12_9MICO
Multidrug resistance protein 3 {ECO:0000313|EMBL:KJL20471.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
MFS family transporter
SCNpilot_expt_1000_bf_scaffold_544_curated_18
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

17414..17851
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003233A57
MarR family transcriptional regulator
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_544_curated_19
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17927..18388
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K2H3_9MICO
MarR family protein {ECO:0000313|EMBL:KJQ56014.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
MarR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_544_curated_20
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

18499..19653
DNA (1155bp) protein (385aa)
oxidoreductase n=1 Tax=Microbacterium barkeri RepID=UPI0002FD2EFE
dehydrogenase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_544_curated_21
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19650..20819
DNA (1170bp) protein (390aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000311F5A9
Contig_31, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89101.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_544_curated_22
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20816..21682
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KG27_9MICO
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:KJQ55698.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
sugar phosphate isomerase/epimerase
SCNpilot_expt_1000_bf_scaffold_544_curated_23
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21782..22528
DNA (747bp) protein (249aa)
3-dehydroshikimate dehydratase {ECO:0000313|EMBL:KJQ55699.1}; EC=4.2.1.118 {ECO:0000313|EMBL:KJQ55699.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Xylose isomerase domain-containing protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I066_9PSEU
sugar phosphate isomerase/epimerase
SCNpilot_expt_1000_bf_scaffold_544_curated_24
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22778..23203
DNA (426bp) protein (142aa)
Chondroitinase-B {ECO:0000313|EMBL:KJL34785.1}; EC=4.2.2.19 {ECO:0000313|EMBL:KJL34785.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI0003795947
algL; lyase precursor
SCNpilot_expt_1000_bf_scaffold_544_curated_25
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23268..24305
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DA0C64
HTH-type transcriptional regulator DegA {ECO:0000313|EMBL:KJL23090.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_544_curated_26
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24302..25405
DNA (1104bp) protein (368aa)
Glycerate 2-kinase {ECO:0000313|EMBL:KJL31613.1}; EC=2.7.1.165 {ECO:0000313|EMBL:KJL31613.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
glycerate kinase; K00865 glycerate kinase [EC:2.7.1.31]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003167511
SCNpilot_expt_1000_bf_scaffold_544_curated_27
Rhodococcus sp. MEB064, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25719..26570
DNA (852bp) protein (284aa)
ABC transporter permease n=1 Tax=Ruania albidiflava RepID=UPI0003B44884
Contig_5, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ20038.1}; TaxID=1587522 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. MEB064.;"
transporter; K02050 NitT/TauT family transport system permease protein rbh
SCNpilot_expt_1000_bf_scaffold_544_curated_28
Janibacter sp. HTCC2649, Janibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26617..27657
DNA (1041bp) protein (347aa)
sulfonate ABC transporter substrate-binding protein n=1 Tax=Ruania albidiflava RepID=UPI0003B53BCE
Uncharacterized protein {ECO:0000313|EMBL:EAP99738.1}; TaxID=313589 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Janibacter.;" source="Janibacter sp. HTCC2649.;"
NMT1/THI5 like domain-containing protein
SCNpilot_expt_1000_bf_scaffold_544_curated_29
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27695..28474
DNA (780bp) protein (260aa)
ABC transporter ATP-binding protein n=1 Tax=Ruania albidiflava RepID=UPI0003B40022
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHC25168.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
ABC transporter ATP-binding protein; K02049 NitT/TauT family transport system ATP-binding protein rbh
SCNpilot_expt_1000_bf_scaffold_544_curated_30
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28596..30308)
DNA (1713bp) protein (571aa)
Phosphoglucomutase {ECO:0000313|EMBL:EYT60230.1}; EC=5.4.2.2 {ECO:0000313|EMBL:EYT60230.1};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
pgm; phosphoglucomutase; K01835 phosphoglucomutase [EC:5.4.2.2]
phosphoglucomutase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003477966
Displaying items 1-30 of 114 in total

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