ggKbase home page

SCNpilot_expt_1000_bf_scaffold_878_curated_25

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(20927..21685)

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 253.0
  • Bit_score: 479
  • Evalue 2.50e-132
sdhB; succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] similarity KEGG
DB: KEGG
  • Identity: 88.5
  • Coverage: 252.0
  • Bit_score: 467
  • Evalue 2.20e-129
succinate dehydrogenase n=1 Tax=Microbacterium barkeri RepID=UPI0002D3727C similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 253.0
  • Bit_score: 477
  • Evalue 9.00e-132

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. MEJ108Y → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGTCGAACGCCGTCGCAGAGGCTCCTGCAAACGATTCGGGTGTGCAGTCCTTCCTCGTCACGTTCATCGTGCGCCGCTTCGACCCCGAGAAGGACGCCGAGCCGCACTGGGTGGACTACGACGTCGAGCTGTACTCGACCGACCGAGTGCTGGACGCCCTGCACAAGATCAAGTGGGAGGTGGACGGCTCGCTGGCCTTCCGCCGCTCGTGCGCTCACGGCGTGTGCGGATCGGATGCCATGCGCATCAACGGCCGCAACCGCCTGGCCTGCAAGACGCTGATCAAGGACCTCGACATCTCGAAGCCGATCTACGTCGAGGCCATCAAGGGCCTGCCGCTGGAGAAGGACCTCATCGTCGACATGGAGCCGTTCTTCGCCTCCTACCGCGAGGTGCAGCCGTTCCTGATCGCCAACTCCGCTCCCCCGAAGGACAAGGAGCGCATCCAGACGATCGCCGACCGCGAGATCTTCGACGACACCACCAAGTGCATCCTGTGCGCGGCGTGCACGTCGTCGTGCCCGGTGTTCTGGACCGACGGGCAGTACTTCGGTCCGGCCGCGATCGTGAACGCGCACCGCTTCATCTTCGACTCGCGCGATGACGCGGCCGACGTGCGCCTGGACATCCTCAACGACAAGGAGGGCGTGTGGCGCTGCCGCACGACCTTCAACTGCACCGAGGCATGCCCCCGCGGCATCGAGGTCACCAAGGCCATCGCCGAGGTCAAGCAGGCCGTCCTGCGCGGCGGCCGCTGA
PROTEIN sequence
Length: 253
MSNAVAEAPANDSGVQSFLVTFIVRRFDPEKDAEPHWVDYDVELYSTDRVLDALHKIKWEVDGSLAFRRSCAHGVCGSDAMRINGRNRLACKTLIKDLDISKPIYVEAIKGLPLEKDLIVDMEPFFASYREVQPFLIANSAPPKDKERIQTIADREIFDDTTKCILCAACTSSCPVFWTDGQYFGPAAIVNAHRFIFDSRDDAADVRLDILNDKEGVWRCRTTFNCTEACPRGIEVTKAIAEVKQAVLRGGR*