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SCNpilot_expt_1000_bf_scaffold_676_curated_16

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 13743..14747

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator id=7719971 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 65.9
  • Coverage: 331.0
  • Bit_score: 452
  • Evalue 3.10e-124
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.1
  • Coverage: 330.0
  • Bit_score: 427
  • Evalue 3.40e-117
Putative transcriptional regulator, LacI-family {ECO:0000313|EMBL:CAN00912.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 330.0
  • Bit_score: 427
  • Evalue 1.50e-116

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
GTGGACCGCGTCCGGGCACCGAACATCCGCGATGTCGCGCGCCTGGCCGGAGTCTCGTACCAGACCGTCTCCCGGGTGCTGAACGACTCCCCCAACATCCGCTCGGCGACCAGGGATCGCGTGCTGGCCGCGATCGACGAGCTCGGCTACCGCCCGAACCAGGCCGCGCGCACGCTCGTGACCAGCCGATCGCGCACCATCGGCGTGCTCACCTCGATGTCGGTGCACTACGGCCCGACCACCGCGATCAACGCGCTCGAGGTCTCGGCCCGCGAGGCGGGGTACCGCATCAGCCTGACCACGCTGGCCACGGGCGATGACGCCTCGATCCGCGGCAGCCTGGACTTCCTGATGTCGCAGGGCATCGAGGCGCTCGTCGTGATCGCACCACAGGAGCGCATCATCCAGGCCCTCGCAGACGCGTCGATGAGCATCCCCACGATCACGCTCGACACGAGCGGACGCGCGAACGCGCACAGCGTCGGCGTCGATCAGGTCACGGGGGCGCGCCTGGCCACCCAGCACCTCATCGACCTCGGCCACACCGACATCGTGCACATCGCCGGTCCTCGCGACTGGATCGAGGCGGATGCCAGGATGCAGGGCTACCTGCAGGCCCTCTCGGATGCCGACCTTCGCACCCGGGCGCCCATCCTCGGCGACTGGAGCGCGGCCTTCGGGTACTACGCGGGTCGTGAGCTGCTGCGCTACCGGGACTTCACGGCGGTGTTCGCGGGCAACGACCAGATGGCCCTCGGCTTCCTGCACGCCTGCCGGGAGATGGGCATCGACGCTCCGGGCGAGATGAGCGTCGTCGGCTTCGACGACATCCCCGAGGCCGCGCACTTCGCCCCGCCGCTGACCACCGTGCGCCAGGACTTCGCCGAGATCGGCCGCCGCGCCATGTCGATGCTGCTCGCCCTGATCGACGGCGGGGATGCCGAGCAGGCGCGGGTCCTGCCCGAGCTCGTGGTGCGTGCGTCGACGGCGCCCGCGCCGCGCTGA
PROTEIN sequence
Length: 335
VDRVRAPNIRDVARLAGVSYQTVSRVLNDSPNIRSATRDRVLAAIDELGYRPNQAARTLVTSRSRTIGVLTSMSVHYGPTTAINALEVSAREAGYRISLTTLATGDDASIRGSLDFLMSQGIEALVVIAPQERIIQALADASMSIPTITLDTSGRANAHSVGVDQVTGARLATQHLIDLGHTDIVHIAGPRDWIEADARMQGYLQALSDADLRTRAPILGDWSAAFGYYAGRELLRYRDFTAVFAGNDQMALGFLHACREMGIDAPGEMSVVGFDDIPEAAHFAPPLTTVRQDFAEIGRRAMSMLLALIDGGDAEQARVLPELVVRASTAPAPR*