name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_676_curated_1
Corynebacterium glutamicum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(2..562)
|
hypothetical protein; K02041 phosphonate transport system ATP-binding protein [EC:3.6.3.28]
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=340322 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium glutamicum (strain R).;"
phosphonate ABC transporter ATP-binding protein n=1 Tax=Ruania albidiflava RepID=UPI0003B38AC1
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_2
[Brevibacterium] flavum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(590..1606)
|
ABC transporter substrate-binding protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A747
PctA; ABC-type transporter, periplasmic component
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AKF27439.1}; TaxID=92706 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="[Brevibacterium] flavum.;"
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_3
[Brevibacterium] flavum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(1648..2325)
|
hypothetical protein n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A748
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKF27440.1}; TaxID=92706 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="[Brevibacterium] flavum.;"
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_4
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(2408..3022)
|
L-serine deaminase n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262A749
Amino acid deaminase {ECO:0000313|EMBL:KIC59872.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
L-serine deaminase
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_5
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(3028..4062)
|
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadir
psrA; phosphoribosylpyrophosphate synthetase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
Ribose-phosphate pyrophosphokinase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KTC2_9MICO
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_6
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(4072..5502)
|
glmU; N-acetylglucosamine-1-phosphate uridyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034700F6
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_7
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
5698..6198
|
Putative N-acetyltransferase YsnE {ECO:0000313|EMBL:KJQ54514.1}; EC=2.3.1.- {ECO:0000313|EMBL:KJQ54514.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
N-acetyltransferase GCN5; K03829 putative acetyltransferase [EC:2.3.1.-]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KF85_9MICO
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_8
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
6206..6700
|
MarR family transcriptional regulator n=1 Tax=Microbacterium barkeri RepID=UPI0002FAFD7F
HTH-type transcriptional repressor NicR {ECO:0000313|EMBL:KJL28895.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
marR; transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_9
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
6709..7704
|
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:KJL20769.1}; EC=5.4.99.28 {ECO:0000313|EMBL:KJL20769.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003752CD0
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_10
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(7655..8116)
|
Type 11 methyltransferase n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2XEQ7_9NOCA
Type 11 methyltransferase {ECO:0000313|EMBL:EME22039.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
type 11 methyltransferase
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_11
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(8185..8844)
|
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E46365
Methionine import system permease protein MetP {ECO:0000313|EMBL:KJQ54504.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
methionine ABC transporter, permease component
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_12
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(8844..9863)
|
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003175777
putative metal ABC transporter ATP-binding protein; K02071 D-methionine transport system ATP-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_13
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(9960..10865)
|
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031DDE78
D-methionine-binding lipoprotein MetQ {ECO:0000313|EMBL:KJL20766.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
methionine ABC transporter, substrate-binding protein
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_14
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(11152..11793)
|
hypothetical protein n=1 Tax=Ruania albidiflava RepID=UPI0003B37D97
DNA-binding transcriptional repressor AcrR {ECO:0000313|EMBL:KJL20763.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
TetR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_15
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(11831..13633)
|
ABC transporter ATPase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C4CCF
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJL20760.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ATPase components of ABC transporters with duplicated ATPase domains
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_16
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
13743..14747
|
LacI family transcriptional regulator id=7719971 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
LacI family transcriptional regulator
Putative transcriptional regulator, LacI-family {ECO:0000313|EMBL:CAN00912.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;"
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_17
unknown
|
Not on your lists |
14923..15435
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_676_curated_18
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
15432..16553
|
sugar ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000346CF80
ABC xylose transport system, periplasmic component; K10546 putative multiple sugar transport system substrate-binding protein
ABC-type xylose transport system, periplasmic component {ECO:0000313|EMBL:BAJ75871.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_19
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
16627..18171
|
xylose ABC transporter ATP-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B31FDD
sugar ABC transporter ATPase; K10548 putative multiple sugar transport system ATP-binding protein
Xylose ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDP89738.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808.;"
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_20
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
18158..19372
|
ABC-type xylose transport system, permease component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NA43_MICTS
xylose ABC transporter permease; K10547 putative multiple sugar transport system permease protein
ABC-type xylose transport system, permease component {ECO:0000313|EMBL:BAJ75873.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_21
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(19446..20441)
|
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJD0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM78541.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_22
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
20505..21521
|
Carboxylesterase NlhH {ECO:0000313|EMBL:KJL24945.1}; EC=3.1.1.1 {ECO:0000313|EMBL:KJL24945.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K9H0_9MICO
esterase/lipase
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_23
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
21533..22507
|
Carboxylesterase NlhH {ECO:0000313|EMBL:KJL24944.1}; EC=3.1.1.1 {ECO:0000313|EMBL:KJL24944.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KK47_9MICO
esterase/lipase
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_24
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
22539..23819
|
Permease of the major facilitator superfamily n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N8K1_MICTS
Major Facilitator Superfamily protein {ECO:0000313|EMBL:KJL33324.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
permease of the major facilitator superfamily
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_25
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
24112..24588
|
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348D6AA
AsnC family transcriptional regulator {ECO:0000313|EMBL:EYT61365.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
AsnC family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_26
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(24613..25545)
|
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003452F49
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_27
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(25547..26611)
|
L-glyceraldehyde 3-phosphate reductase {ECO:0000313|EMBL:KJL21595.1}; EC=1.1.1.- {ECO:0000313|EMBL:KJL21595.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
L-glyceraldehyde 3-phosphate reductase n=1 Tax=Microbacterium barkeri RepID=UPI0002EA89DF
oxidoreductase
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_28
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(26621..27469)
|
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=582680 species="Bacteria; Actinobacteria
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
16S rRNA methyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0002D46286
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_29
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
27516..28826
|
antibiotic transporter n=1 Tax=Microbacterium yannicii RepID=UPI000318342A
Antibiotic transporter {ECO:0000313|EMBL:EYT61369.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
major facilitator superfamily protein
|
|
SCNpilot_expt_1000_bf_scaffold_676_curated_30
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
comp(28820..29404)
|
Putative ribosomal N-acetyltransferase YdaF {ECO:0000313|EMBL:KJL34652.1}; EC=2.3.1.- {ECO:0000313|EMBL:KJL34652.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036364DB
amino-acid acetyltransferase
|