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SCNpilot_expt_1000_bf_scaffold_676_curated_9

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 6709..7704

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal large subunit pseudouridine synthase A {ECO:0000313|EMBL:KJL20769.1}; EC=5.4.99.28 {ECO:0000313|EMBL:KJL20769.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 315.0
  • Bit_score: 533
  • Evalue 1.90e-148
pseudouridine synthase; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 337.0
  • Bit_score: 403
  • Evalue 8.90e-110
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003752CD0 similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 332.0
  • Bit_score: 477
  • Evalue 1.20e-131

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGGCGATGACCTCACCGCTGCCCGTGCGCGACGGCGTCGGCGCGACGCGCCTGCACCTGCCGCTGAGTGGTCCCTGGCCCACGATCGGCGCCTACATGGCCGAGCGCTTCTTCCACCTCGACCCCGAGCGCCTGCTGACGCGCTTCGACCGCGGAGAGATCGTGGCCCGTGACGGATCGCCCCTCACCAGGGACACCCCGCTCGGCGCGCACGAGTTCGTCTGGTACTACCGGGAGCCGCCGGTGGAGCGCGAGATCCCGTTCGAGATCGAGGTGCTGCACCAGGACCGCGACCTCGTGGTGGCCGACAAGCCGCACTTCCTGCCGACCACCCCGGGCGGGAAGTACCTGCAGAACTCCGCACTGGTGCGGCTGCGGAACCTGCTCGGCATCCCCGAACTGACCCCGATCCACCGCCTGGACCGGGCGACGGCCGGCCTGCTGATGTTCTCGGTGCGCCCGGAGACCCGCGGCGCCTACCAGCTGCTGTTCGAGAACCGCCGGGTGGAGAAGGTCTACGAGGCGGTGTCGGCCCTGCCCGAGGTGTGGGATCCGGCATCCCCCGCGCTCGACGGCCGTCCGTTCCCGATCGTCCACCGCAACCACATCGAGAAGCTCCGCGCGAACGTGTGCGTGCGGGTCGATGCCGAGCGCGAGCCCAACTCCGAGACGCTGATCGAGCTGATCGACGCGGACGAGCGCGTGCTGCACACGCGACTCCGGCCGCGCTCCGGGAAGATGCATCAGCTGCGGGTGCACCTGGCGGCGCTGGGCGCTGGCATCCTCAACGACGGCTTCTACCCCGTGCTCCTGCCCGAAGCACCGGATGACTTCACCAGCCCCCTGCAGCTGCTGGCCCGCGAACTGCGGTTCACCGACCCGCTCACCGGCACCGCACGGGAGTTCGTGACGCGCAGGACCCTGCAGGAGGCTCCGGCTCCCTCCGTCAGGCCGGAACAGCGCCCCGCGCAGCCCACGCCACCGCGGGGAGCGTGA
PROTEIN sequence
Length: 332
MAMTSPLPVRDGVGATRLHLPLSGPWPTIGAYMAERFFHLDPERLLTRFDRGEIVARDGSPLTRDTPLGAHEFVWYYREPPVEREIPFEIEVLHQDRDLVVADKPHFLPTTPGGKYLQNSALVRLRNLLGIPELTPIHRLDRATAGLLMFSVRPETRGAYQLLFENRRVEKVYEAVSALPEVWDPASPALDGRPFPIVHRNHIEKLRANVCVRVDAEREPNSETLIELIDADERVLHTRLRPRSGKMHQLRVHLAALGAGILNDGFYPVLLPEAPDDFTSPLQLLARELRFTDPLTGTAREFVTRRTLQEAPAPSVRPEQRPAQPTPPRGA*