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SCNpilot_expt_1000_bf_scaffold_676_curated_8

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 6206..6700

Top 3 Functional Annotations

Value Algorithm Source
MarR family transcriptional regulator n=1 Tax=Microbacterium barkeri RepID=UPI0002FAFD7F similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 164.0
  • Bit_score: 294
  • Evalue 5.40e-77
HTH-type transcriptional repressor NicR {ECO:0000313|EMBL:KJL28895.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.2
  • Coverage: 164.0
  • Bit_score: 296
  • Evalue 2.60e-77
marR; transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 163.0
  • Bit_score: 261
  • Evalue 2.10e-67

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 495
ATGAGCGAGGTGGATGAGGTCGATCGGATCGTCAGCGCGTGGAACGCGCAGCGTCCCGACCTGGACTTCTCCCCGCTCGAGGTGCTCTCCCGCATGGACAGGCTCTCCCGCCATCTCGACCGGGCCAGGCGCGAGGTGTTCCACCGCAGCGACATCGAGCCCTGGGAATGGGATGTGCTCTCGGCACTGCGGCGCGCGGGTTCTCCCTTCCAGCTCTCACCCAAGCAGCTGCTGCAGCAGACACTGGTGACCAGCGGCACCATGACCAACCGCATCGACCGGCTCGTCGGCCGCCGGTTCGTGCGCCGCGAGGCGGATCCGGATGACGGCCGCAGCATCCTGGTCATCCTCACCGACGACGGGAGGGTGCGGGTGGATGCCGCGATCACCCGACTCGTGGACGCCGAGGCCGAGCTGCTGCAGGCGCTGCCCCGCGCGGACCGCGACCGGCTGGCGGGCCTCCTGCGCAAGCTCAGCCTGAGCTTCGACGTCTGA
PROTEIN sequence
Length: 165
MSEVDEVDRIVSAWNAQRPDLDFSPLEVLSRMDRLSRHLDRARREVFHRSDIEPWEWDVLSALRRAGSPFQLSPKQLLQQTLVTSGTMTNRIDRLVGRRFVRREADPDDGRSILVILTDDGRVRVDAAITRLVDAEAELLQALPRADRDRLAGLLRKLSLSFDV*