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SCNpilot_expt_1000_bf_scaffold_676_curated_26

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(24613..25545)

Top 3 Functional Annotations

Value Algorithm Source
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 310.0
  • Bit_score: 445
  • Evalue 6.50e-122
ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 308.0
  • Bit_score: 343
  • Evalue 7.80e-92
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003452F49 similarity UNIREF
DB: UNIREF100
  • Identity: 71.0
  • Coverage: 310.0
  • Bit_score: 423
  • Evalue 2.50e-115

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 933
GTGAGCTTCGCCCGACATCCGGATGCCGTGCATGTGCGCGCGCCGGGGAAGATCAACGTCTACCTGGGGGTGGGCCCACGTCATGACGACGGCTACCACGCTCTGGCGACGGTCTTCCAGGCGGTGTCGCTGTACGAGGACGTGTACGCCTCGGCATCCGACGACTTCTCGATCGCTGTCGTCGGCGACGTCGACATCTCCGGGGTGCCGTTGGACGACCGAAATCTCGCGCTGCGCGCGGCCAAGCTGCTCGCACAGACGGCCGGCGTGACGCAGGGCGTGCATCTCGACATCCGCAAGGGCGTCCCCGTCGCGGGTGGTATGGGTGGCGGCTCGGCGGACGCCGCGGCCGCGCTGGTGGCCTGCGACGCCCTGTGGGGCACCGAGCTCGGTCCCCGCGGGCTGCACGAGCTGGCCGCCCGGCTCGGCGCCGACGTGCCCTTCGCGCTGCACGGCGGCACGGCGGTCGGGACCGGACGCGGTGACGTGCTGACGCCTGCGCTGGCGCGAGGACGGTTCGACTGGGTGCTCGTGCTCAGCGACACCGGCCTGTCCACCCCCGAGGTGTACGGCAGGCTGGACAAGCTGCGGATGCACGGCGAGGCGCTCGCCGACGACCCCACCGAGCTGCTCGAGGTGCCCGTCGCGGTGCTGCAGGCGCTGCGGGCCGGAGACGCCACCGAGCTCGCGCCGGTGATGATGAACGACCTCGAGGCCGCGGCCGTCGTGGGACGCCCCGACCTCGAGCTGACGCTCGCCGACGGGGTGCGGATGGGCGCGCTCACCGGCATCGTCTCCGGTTCCGGTCCGACCACGGCGTTCCTGTGCGGGGGCCCCGAAGCGGCGCGCGCCGTGCAGGACGAGCTGAAGGCCACGGGCCGCGAGGCGCTGCATGTGCACGGTCCGGTGCCCGGCGCCCAGATCATCGGCTGA
PROTEIN sequence
Length: 311
VSFARHPDAVHVRAPGKINVYLGVGPRHDDGYHALATVFQAVSLYEDVYASASDDFSIAVVGDVDISGVPLDDRNLALRAAKLLAQTAGVTQGVHLDIRKGVPVAGGMGGGSADAAAALVACDALWGTELGPRGLHELAARLGADVPFALHGGTAVGTGRGDVLTPALARGRFDWVLVLSDTGLSTPEVYGRLDKLRMHGEALADDPTELLEVPVAVLQALRAGDATELAPVMMNDLEAAAVVGRPDLELTLADGVRMGALTGIVSGSGPTTAFLCGGPEAARAVQDELKATGREALHVHGPVPGAQIIG*