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SCNpilot_expt_1000_bf_scaffold_1291_curated_6

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(5448..5690)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00037BA5D3 similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 80.0
  • Bit_score: 146
  • Evalue 1.50e-32
Type IV secretion protein Rhs {ECO:0000313|EMBL:KDA06293.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.5
  • Coverage: 80.0
  • Bit_score: 144
  • Evalue 4.70e-32
rhs family protein similarity KEGG
DB: KEGG
  • Identity: 64.2
  • Coverage: 81.0
  • Bit_score: 113
  • Evalue 2.60e-23

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 243
ATGACCGAGGAACGAGACCGCCCTCCGCTTCGCACCCGCATCCGCGAAGCCGGCGGCTTCTACGCGTGGTTCAACTCCCGGCTGATCCGTCTGGCGGGTCCGGCGGCCGTCGGCCCCTATGAGAGCACGCCGCCGCCGAGCGCCGCACAGCGCGCGGAACGCGCCTGCCCGCTGTGCGGGAAGCCGATGAACCTGCACGAGATCGACCGCTCGGGACCCAAGCCGCTCATGCACTGCCCCTGA
PROTEIN sequence
Length: 81
MTEERDRPPLRTRIREAGGFYAWFNSRLIRLAGPAAVGPYESTPPPSAAQRAERACPLCGKPMNLHEIDRSGPKPLMHCP*