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SCNpilot_expt_1000_bf_scaffold_1474_curated_16

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(11646..11954)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L21 n=1 Tax=Microbacterium barkeri RepID=UPI0002D3CFC7 similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 97.0
  • Bit_score: 178
  • Evalue 2.70e-42
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 102.0
  • Bit_score: 189
  • Evalue 2.10e-45
rplU; ribosomal protein L21; K02888 large subunit ribosomal protein L21 similarity KEGG
DB: KEGG
  • Identity: 84.3
  • Coverage: 102.0
  • Bit_score: 170
  • Evalue 3.90e-40

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Taxonomy

Microbacterium sp. SA39 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 309
GTGGTTTACGCAGTAGTGCGCGCCGGTGGCCGGCAGGAGAAGGTCGAGGTCGGTACGATCGTTCAGCTCGACCGTGTTCAGGCTGCCCAGGGCGAGAAGATCGAGCTTCCCGCCGTGCTTCTCGTCGACGGTGCCACGGTGACCACCGACGCGGACAAGCTGGCGAAGGTCAAGGTCACGGCTGAGGTCCTCGGCGACCTCCGCGGCCCGAAGATCATCATCCAGAAGTACAAGAACAAGACCGGCTACAAGAAGCGCCAGGGCCACCGTCAGGACCTGACCCGCGTCAAGATCACCGGCATCAAGTAA
PROTEIN sequence
Length: 103
VVYAVVRAGGRQEKVEVGTIVQLDRVQAAQGEKIELPAVLLVDGATVTTDADKLAKVKVTAEVLGDLRGPKIIIQKYKNKTGYKKRQGHRQDLTRVKITGIK*