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SCNpilot_expt_1000_bf_scaffold_1474_curated

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1474_curated_1
Actinomyces georgiae, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..1076)
DNA (1074bp) protein (358aa)
Site-specific recombinase, phage integrase family n=1 Tax=Actinomyces georgiae F0490 RepID=J0MNM9_9ACTO
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EJF35839.1}; TaxID=1125717 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces georgiae F0490.;"
phage integrase
SCNpilot_expt_1000_bf_scaffold_1474_curated_2
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(1073..2290)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Agromyces italicus RepID=UPI0003B40291
integrase family protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_1474_curated_3
unknown

Not on your lists

comp(2287..2607)
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1474_curated_4
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2918..3709
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJU6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL20121.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1474_curated_5
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3711..4244
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F0A4DF
Uncharacterized protein {ECO:0000313|EMBL:KJL27654.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1474_curated_6
Cryobacterium sp. MLB-32, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4307..4732
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Brevibacterium linens RepID=UPI0001BC2D30
Membrane protein {ECO:0000313|EMBL:KFF58037.1}; TaxID=1529318 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium sp. MLB-32.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1474_curated_7
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4819..5136
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E32DF9
Uncharacterized protein {ECO:0000313|EMBL:KJL25280.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
peptide ABC transporter permease
SCNpilot_expt_1000_bf_scaffold_1474_curated_8
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5147..5524)
DNA (378bp) protein (126aa)
iojap family protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003473FD9
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein; K09710 ribosome-associated protein
SCNpilot_expt_1000_bf_scaffold_1474_curated_9
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5524..6786)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000345EB4D
Uncharacterized protein {ECO:0000313|EMBL:EYT58965.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1474_curated_10
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6783..7346)
DNA (564bp) protein (188aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
nadD; nicotinic acid mononucleotide adenylyltransferase; K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
nicotinic acid mononucleotide adenylyltransferase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003800C50
SCNpilot_expt_1000_bf_scaffold_1474_curated_11
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(7393..7602)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347867B
4-hydroxybenzoate polyprenyltransferase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_1474_curated_12
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7652..8929)
DNA (1278bp) protein (426aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;
proA; gamma-glutamyl phosphate reductase; K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003155D5C
SCNpilot_expt_1000_bf_scaffold_1474_curated_13
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8983..9771)
DNA (789bp) protein (263aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
proB; glutamate 5-kinase; K00931 glutamate 5-kinase [EC:2.7.2.11]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000304B4E3
SCNpilot_expt_1000_bf_scaffold_1474_curated_14
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9768..11267)
DNA (1500bp) protein (500aa)
GTPase CgtA n=1 Tax=Microbacterium barkeri RepID=UPI0002DC4C68
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
obgE; GTPase; K03979 GTP-binding protein
SCNpilot_expt_1000_bf_scaffold_1474_curated_15
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(11368..11625)
DNA (258bp) protein (86aa)
50S ribosomal protein L27 n=1 Tax=Microbacterium sp. TS-1 RepID=U2YJ65_9MICO
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
rpmA; ribosomal protein L27; K02899 large subunit ribosomal protein L27
SCNpilot_expt_1000_bf_scaffold_1474_curated_16
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(11646..11954)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Microbacterium barkeri RepID=UPI0002D3CFC7
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
rplU; ribosomal protein L21; K02888 large subunit ribosomal protein L21
SCNpilot_expt_1000_bf_scaffold_1474_curated_17
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12168..12434
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D2F587
Uncharacterized protein {ECO:0000313|EMBL:KJL17396.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1474_curated_18
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12634..14778)
DNA (2145bp) protein (715aa)
Ribonuclease G {ECO:0000313|EMBL:KJL27637.1}; EC=3.1.26.- {ECO:0000313|EMBL:KJL27637.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
rng; ribonuclease G and E; K08300 ribonuclease E [EC:3.1.26.12]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L030_9MICO
SCNpilot_expt_1000_bf_scaffold_1474_curated_19
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15048..15656
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000309E422
Vitamin K epoxide reductase family protein {ECO:0000313|EMBL:KJL32702.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1474_curated_20
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15717..16133)
DNA (417bp) protein (139aa)
Nucleoside diphosphate kinase {ECO:0000256|RuleBase:RU004013}; EC=2.7.4.6 {ECO:0000256|RuleBase:RU004013};; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
ndk; nucleoside diphosphate kinase; K00940 nucleoside-diphosphate kinase [EC:2.7.4.6]
nucleoside diphosphate kinase n=1 Tax=Microbacterium barkeri RepID=UPI0003099015
SCNpilot_expt_1000_bf_scaffold_1474_curated_21
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16135..16545)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D70034
Allophanate hydrolase {ECO:0000313|EMBL:KDA06263.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
allophanate hydrolase subunit 2
SCNpilot_expt_1000_bf_scaffold_1474_curated_22
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16542..17894)
DNA (1353bp) protein (451aa)
Folylpolyglutamate synthase {ECO:0000313|EMBL:KJQ54966.1}; EC=6.3.2.17 {ECO:0000313|EMBL:KJQ54966.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
folylpolyglutamate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
folylpolyglutamate synthase n=1 Tax=Microbacterium barkeri RepID=UPI0002DADFB3
SCNpilot_expt_1000_bf_scaffold_1474_curated_23
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(17891..21217)
DNA (3327bp) protein (1109aa)
ileS; isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5]
isoleucyl-tRNA synthase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003484AAC
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_expt_1000_bf_scaffold_1474_curated_24
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(21440..22126)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Ruania albidiflava RepID=UPI0003B5E3D4
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_expt_1000_bf_scaffold_1474_curated_25
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22123..22344)
DNA (222bp) protein (74aa)
CopG domain protein DNA-binding domain protein n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BW28_BEUC1
DNA-binding domain-containing protein
CopG domain protein DNA-binding domain protein {ECO:0000313|EMBL:ACQ80629.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
SCNpilot_expt_1000_bf_scaffold_1474_curated_26
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22681..22935
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EE2E14
Uncharacterized protein {ECO:0000313|EMBL:KJL32697.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SCNpilot_expt_1000_bf_scaffold_1474_curated_27
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22989..23240
DNA (252bp) protein (84aa)
Putative antitoxin n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XGN9_MICPN
putative antitoxin
Putative antitoxin {ECO:0000313|EMBL:BAK35521.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCNpilot_expt_1000_bf_scaffold_1474_curated_28
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23237..23491
DNA (255bp) protein (85aa)
Putative toxin n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XGN8_MICPN
putative toxin
Putative toxin {ECO:0000313|EMBL:BAK35520.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCNpilot_expt_1000_bf_scaffold_1474_curated_29
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23512..24990)
DNA (1479bp) protein (493aa)
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:KJL22726.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL22726.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003481B5C
ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_1474_curated_30
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24987..25769)
DNA (783bp) protein (261aa)
Uncharacterized protein (Fragment) n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFT3_9MICO
Putative D,D-dipeptide transport system permease protein DdpC {ECO:0000313|EMBL:KJQ54961.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
dipeptide/oligopeptide/nickel ABC transporter permease; K02034 peptide/nickel transport system permease protein
Displaying items 1-30 of 43 in total

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