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SCNpilot_expt_1000_bf_scaffold_1202_curated_16

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 8499..9044

Top 3 Functional Annotations

Value Algorithm Source
Lysine decarboxylase (EC:4.1.1.18) similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 177.0
  • Bit_score: 240
  • Evalue 5.40e-61
Lysine decarboxylase {ECO:0000313|EMBL:CCA58447.1}; EC=4.1.1.18 {ECO:0000313|EMBL:CCA58447.1};; TaxID=953739 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 177.0
  • Bit_score: 240
  • Evalue 2.40e-60
lysine decarboxylase n=1 Tax=Streptomyces violaceoniger RepID=UPI0003C75C91 similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 178.0
  • Bit_score: 240
  • Evalue 1.00e-60

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Taxonomy

Streptomyces venezuelae → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 546
GTGAACATCTGCGTCTTCCTCTCCGCATCCGATCTCGACGACCGCTACGCAAGCGCCGCTCGGGAGCTGGGACGATTGATCGCCGAGCAGGGGCACACCCTGGTGTGGGGCGCGAGCGACGTGGGGCTGATGAAGGTTCTTGCGGATGCTGTCGATGACGCCGGCGGGCGGCTGATCGGAGTCTCCGTGGACTTCCTCGCGGCCAAGGCCCGCCCGCTGCAGGAGCCGGACGAGCTGATCGTCGGCGCCGACCTCGCCGAACGCAAGGCGACGCTGCTGGCCCGCAGCGATGCCGTCGTGATCATGGTCGGCGGCAGCGGCACGCTCGACGAGGCGACCGACGTGCTCGAACTGCGCAAGCACGGCATCTACCCCGGCCCGGTCGTCGTGCTGAACACGGACGGCTTCTACGACGGTCTGCAGCAGCAGTTCGCCCGCATGGATGCGGAAGGCTTCCTGCCCGTCCCGCTCGCTCAGCTGTGCACCTTCGTGGATGAGCCGGAGGAGGCGCTCGCGGTCATCCAGCAGCACGCCCCCACAGCGTAG
PROTEIN sequence
Length: 182
VNICVFLSASDLDDRYASAARELGRLIAEQGHTLVWGASDVGLMKVLADAVDDAGGRLIGVSVDFLAAKARPLQEPDELIVGADLAERKATLLARSDAVVIMVGGSGTLDEATDVLELRKHGIYPGPVVVLNTDGFYDGLQQQFARMDAEGFLPVPLAQLCTFVDEPEEALAVIQQHAPTA*