ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1241_curated_30

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(32346..33152)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (Uridine(2479)-2'-O)-methyltransferase {ECO:0000313|EMBL:KJL29014.1}; EC=2.1.1.208 {ECO:0000313|EMBL:KJL29014.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 268.0
  • Bit_score: 447
  • Evalue 1.10e-122
RNA methyltransferase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KIR3_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 84.0
  • Coverage: 268.0
  • Bit_score: 445
  • Evalue 3.10e-122
rRNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 268.0
  • Bit_score: 391
  • Evalue 2.80e-106

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 807
GTGCTCGAGAACCCCCGCTCTCCCCGAGTCCGTGCCGTCGCCAAGCTGACCAAGCGCAGCGCCAGGACCGAGACGGGACTCTTCCTGCTGGAGGGACCACAGTCGGTCCGCGAAGCGCTGAACTACCTCCCCGGCGCGATCGTCGAGCTGTACTCCACGCCGTCGGCATGGGAGAAGCACTCCGATGTCCGGACGCTGGCGTCGGAGCACGGCATCGACGTCGAGTACGTCACCGAACAGGTGCTCGCGGCGATGGCGGACACGGTCACACCGCAGGGCATCGTCGCCGTCGCGCGCCAGACGCCCACCTCGGTGCGCGACATCTTCGCGGCGGGGCCGCGGCTGATCGCGATCTGCGAGGAGGTGCGCGATCCCGGCAACCTGGGCACGATCATCCGTGCCGCGGATGCCGCGGGAGCGGATGCCGTGGTGCTGACCGGCCGCACCGTCGACCCGTACAACCCGAAGGTGGTCCGCTCGACCACCGGTTCGCTGTTCCACCTGCCGTTCTCGGTGGGCGGCGATCTGAACGACGTCGTCTCGCGCGCCCACGACGCGGGCCTCCAGGTGCTCGCCGCCGACGTGAAGGGCGATGACCTGCTCGCCGCGCGCGCCGAGGGCGTGCTGGAGCGTCCCACGGCATGGCTGTTCGGGAACGAGGCGCGCGGGCTCGACGACGACATGCTCGACCTCGCCGACCGCGCCCTGAAGCTGCCGATCTACGGTCGGGCCGAGTCGTTGAACCTCGCGACCGCGGCCAGTGTGTGCCTGTACGAGAGCGCCTTCGCGCAGCGCGTGGCCGGATGA
PROTEIN sequence
Length: 269
VLENPRSPRVRAVAKLTKRSARTETGLFLLEGPQSVREALNYLPGAIVELYSTPSAWEKHSDVRTLASEHGIDVEYVTEQVLAAMADTVTPQGIVAVARQTPTSVRDIFAAGPRLIAICEEVRDPGNLGTIIRAADAAGADAVVLTGRTVDPYNPKVVRSTTGSLFHLPFSVGGDLNDVVSRAHDAGLQVLAADVKGDDLLAARAEGVLERPTAWLFGNEARGLDDDMLDLADRALKLPIYGRAESLNLATAASVCLYESAFAQRVAG*