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SCNpilot_expt_1000_bf_scaffold_1241_curated_31

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(33231..33617)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=2 Tax=Microbacterium RepID=H8E2D8_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 126.0
  • Bit_score: 232
  • Evalue 2.00e-58
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 128.0
  • Bit_score: 233
  • Evalue 2.10e-58
rplT; ribosomal protein L20; K02887 large subunit ribosomal protein L20 similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 127.0
  • Bit_score: 228
  • Evalue 8.90e-58

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGGCTAGAGTCAAGCGCGCGGTCAACGCGCACAAGAAGCGTCGCGTCATCCTCGAGCGCGCCTCGGGCTACCGCGGTCAGCGTTCGCGTCTGTACCGCAAGGCGAAGGAGCAGGTCACCCACTCCCTCGTCTACGCGTACCGCGACCGTCGCAAGCGCAAGGGCGACTTCCGTCGTCTGTGGATCCAGCGCATCAACGCCGCTGCCCGCCAGAACGGCATCACCTACAACCGCTTCATGCAGGGCCTCGGCCTCGCCGGCGTGCAGGTCGACCGTCGCATGCTGGCCGAGCTGGCCGTCACCGACGCCGCCGCGTTCGCCACGCTGGTGGACGTCGCCAAGAAGGCGCTTCCCTCGGACGTCAACGCTCCGAAGGCCGCTGCCTGA
PROTEIN sequence
Length: 129
MARVKRAVNAHKKRRVILERASGYRGQRSRLYRKAKEQVTHSLVYAYRDRRKRKGDFRRLWIQRINAAARQNGITYNRFMQGLGLAGVQVDRRMLAELAVTDAAAFATLVDVAKKALPSDVNAPKAAA*