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SCNpilot_expt_1000_bf_scaffold_1082_curated_20

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(19307..20698)

Top 3 Functional Annotations

Value Algorithm Source
choline transporter n=1 Tax=Agromyces italicus RepID=UPI0003B4AD6D similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 456.0
  • Bit_score: 691
  • Evalue 5.50e-196
Choline transporter {ECO:0000313|EMBL:EXJ52163.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 401.0
  • Bit_score: 596
  • Evalue 3.40e-167
choline/carnitine/betaine transport; K02168 high-affinity choline transport protein similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 382.0
  • Bit_score: 569
  • Evalue 1.00e-159

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1392
GTGCACGCCTGGTCGATCTACGTGGTGATCGGGCTCGCCCTCGCCTACGCCATCCATCGGCGACGCCGGCCGGTGTCGATCCGATGGACCCTGGAACCGCTGCTCGGCAAGCGCGTCGAAGGCGGCTGGGGGCACGCGATCGACGTGATCGCCCTGGTCGGCACGCTGTTCGGCGTCGCCACGTCGCTGGGTCTCGGGGTGCTGCAGATGAGCGCCGGCCTGCACTCCGCCGGCTTCGCGAATCCCGACGAGACCACGCAGGTGGTGCTCATCCTGGTCATCTCCGTGTTCGTGCTGATGTCGGTGCTGTCCGGCGTGACCAAGGGCATGAAGTGGCTGTCGAATGCGAACCTCGTGCTCGCGGGCCTGCTGGTGATCTATCTGCTCGCGGCGGGGCCGACGGAGTTCCTGCTGCGCGAGTTCGTGCAGTCCCTCGGCTACTACATCCAGAACTTCGTGGGCCTCTCCTTCAACGTCAGCGCGTTCCAGGGCGCCGCCGGCGAGCAGTGGCAGGCCTCCTGGACCTCGTTCTACTGGGGCTGGTGGATCTCGTGGGCGCCGTTCGTGGGGATCTTCATCGCCCGCGTCTCGAAGGGGCGCACGGTGCGCGAGTTCGTGATCGGGGTGATCCTGGTGCCCACTCTGATCGGCGTGCTGTGGTTCTCGGTGCTCGGGGGCTCGGCCCTGGCGATGGAGCTCGCGAAGCCCGGCTCCCTCACCGCTCCCGACGGAACAGTCGACCTGCAGGGAGCGCTGTTCGCGATGCTGCAGAACGTGCCCGGCGCCGCCGTGGTGAGCATCGGAGCCATCCTGCTGCTCGCGATCTTCTTCATCACCTCGGCCGATTCCGGCGCCCTGGTGATGGGCATGATCGCCACCGGCGGCAAGCCCGAGCCGAAGCGCTGGATCCGCACCTTCTTCGTCGTGGTCACCGCACTGCTGGCGATCTCGCTGCTCCTGTCGGGCGGGCTCACCGCCCTGCAGACGGCGGCCATCATGATCGCCCTGCCGTTCAGCATCGTGATGCTGCTGATCTGCTGGTCGACCGTGGTCGCATTCACCCGCGAACGGCGTGCCTATGCCAAGGCGGAACGCGCGCAGTTCATCGACCGCATCGGCGAGTACTACGGCCTCGAGGTCGAGTCGCACGACGCGACCGGGGTGCTGGGCGCTCAGCCCCGCTGGGTGCGTCGGCTGCAGCGCCGGTTCGGGCTGCCCGTGGCGCCGACCGAGCCCATCCGGATCACGCCCGGCGCGCTCTCCCTGGAGAGCCACGGCGACTCCTCCCCCTCCACCCTCGACATCGACGGCCTGGTGGGTGAGGACGAGCTCGCCGGCCTCGACGACCCGGACGTGAAGCAGCAGGACGCGGGTCCGTTCCTGAAGGAATGA
PROTEIN sequence
Length: 464
VHAWSIYVVIGLALAYAIHRRRRPVSIRWTLEPLLGKRVEGGWGHAIDVIALVGTLFGVATSLGLGVLQMSAGLHSAGFANPDETTQVVLILVISVFVLMSVLSGVTKGMKWLSNANLVLAGLLVIYLLAAGPTEFLLREFVQSLGYYIQNFVGLSFNVSAFQGAAGEQWQASWTSFYWGWWISWAPFVGIFIARVSKGRTVREFVIGVILVPTLIGVLWFSVLGGSALAMELAKPGSLTAPDGTVDLQGALFAMLQNVPGAAVVSIGAILLLAIFFITSADSGALVMGMIATGGKPEPKRWIRTFFVVVTALLAISLLLSGGLTALQTAAIMIALPFSIVMLLICWSTVVAFTRERRAYAKAERAQFIDRIGEYYGLEVESHDATGVLGAQPRWVRRLQRRFGLPVAPTEPIRITPGALSLESHGDSSPSTLDIDGLVGEDELAGLDDPDVKQQDAGPFLKE*