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SCNpilot_expt_1000_bf_scaffold_1082_curated_21

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(20671..21204)

Top 3 Functional Annotations

Value Algorithm Source
choline transporter n=1 Tax=Agromyces italicus RepID=UPI0003B4AD6D similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 117.0
  • Bit_score: 160
  • Evalue 1.70e-36
choline-glycine betaine transporter; K02168 high-affinity choline transport protein similarity KEGG
DB: KEGG
  • Identity: 67.0
  • Coverage: 112.0
  • Bit_score: 153
  • Evalue 6.60e-35
Choline-glycine betaine transporter {ECO:0000313|EMBL:BAJ74164.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 112.0
  • Bit_score: 153
  • Evalue 2.90e-34

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 534
GTGTATACCGTGGAGGGCATGAGCGGAAACAGGTACGGGTCGGATCCGAACGCCACCGCAGGCCGCGCGCCGCAGAGCGGGGTGCGACGTGAGCCACAGGTGCTGAGATGGGTCTTCTGGCCCGCTGCCGTGATCGTCGTCGCCTTCGCCCTGTTCGCCCTGCTCGCACCGCACGTCGCCGAGGCCCTGTTCAAGACCGTCCAGACGACGATCGTCAACGCCTTCAACTGGTACTACGTGCTGATCGCCGCCTTCTTCGTGGCGTTCTGCCTGTTCCTCGGCTTCAGCAGGTTCGGTGACATCAAACTGGGCCGCGACGACGAGGAGCCCGAGTTCTCGCTGATGAGCTGGTTCTCCCTGCTGTTCGCGGCGGGAATGGGATCGGCCTGGTCTTCTACGGGGTCAGCGAGCCGCTCTCGCACTTCACGAATCCCCGCCCCGGCGTCACCGGCACGCCGGAGCAGCTGGCCCAGGCCGCACTCGGCCAGACCTACCTGCACTGGGGTGTGCACGCCTGGTCGATCTACGTGGTGA
PROTEIN sequence
Length: 178
VYTVEGMSGNRYGSDPNATAGRAPQSGVRREPQVLRWVFWPAAVIVVAFALFALLAPHVAEALFKTVQTTIVNAFNWYYVLIAAFFVAFCLFLGFSRFGDIKLGRDDEEPEFSLMSWFSLLFAAGMGSAWSSTGSASRSRTSRIPAPASPARRSSWPRPHSARPTCTGVCTPGRSTW*