ggKbase home page

SCNpilot_expt_1000_bf_scaffold_518_curated_6

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(3868..4818)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034811B1 similarity UNIREF
DB: UNIREF100
  • Identity: 74.1
  • Coverage: 309.0
  • Bit_score: 432
  • Evalue 4.10e-118
HTH-type transcriptional regulator GltC {ECO:0000313|EMBL:KJL21340.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.1
  • Coverage: 309.0
  • Bit_score: 433
  • Evalue 2.00e-118
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 313.0
  • Bit_score: 308
  • Evalue 2.20e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGAATCTGGAACAGCTGCGGGGCTTCGTGGAAGTGGCGCGCCTGGGACACTTCACCCGGGCATCCGAGGTGCTGCACGTGGCCCAGCCGTCGCTGAGCAGGCAGATCTCGACCCTCGAGCACGAGCTCGGCGCGCTTCTGCTGCATCGCGCGCGCGGGCACATCTCGCTGACCCCGGCGGGTGAGGTGCTGCTGCCTCGCGCGCAGCGGATCCTGGCCGAGGTGGGTGCGATCCGCGCGGAGATGGACGAGCTCGCCGGTCTCGGCCGAGGTCGGGTGCGCCTGGGCGCGCCGCCGACGCTCTGCGTGAGCCTGGTCGCCGAGGCCATCAGCACCTTCCACGACGCGCACCCCGGTGTGGACCTGCACCTCGCCGAAGGCGGGTCGCGGGCGCTCGTGGAGCAGCTCGCGATCGGCGAGCTCGACATCGCGCTGATCACGGCCTCCGACCTGCGACCCGTTCCCGGCGTGACGCTGAGCCGGCTGCCGCTGCTGTCCGAGGAGCTGGTCGTGGTCACCTCGTCGGCGGATCCGCTCGTCCCCGCCGGCGCCACGGTGGATCTCGCCACGCTCTCCCGGGTCCCGCTGATCGCACTGGATCGCAGCTACGACCTGCGTGCGACGACGGATGCTGCCTTCCGCGCGGCCGGGCTCGCGCCGACCTCCGTGCTGGAGGGGCCGGAGATGGATGCCGTGCTGCGGTTCGTGGAGCGCGGGCTGGGCGTGGCCGTGGTACCGGCGATGGTGCTGACGGACCGTCCGGCGCTGAGCTCTGCGCGGCTGTCGATGCCGCTGACGCGCACCGTGAGCCTGGCGCACCGCTCGGACGTCACGCCCGGCGTGGCCGTCGCGGCCATGCGGGATCTGATCGTGGCGACCGCCGTCCGGTTCGCCGAGCGCGACCCGGCGCTGAGCAGCATCCTCCCGGAGACAGAAGAAACCCCCTCCTGA
PROTEIN sequence
Length: 317
MNLEQLRGFVEVARLGHFTRASEVLHVAQPSLSRQISTLEHELGALLLHRARGHISLTPAGEVLLPRAQRILAEVGAIRAEMDELAGLGRGRVRLGAPPTLCVSLVAEAISTFHDAHPGVDLHLAEGGSRALVEQLAIGELDIALITASDLRPVPGVTLSRLPLLSEELVVVTSSADPLVPAGATVDLATLSRVPLIALDRSYDLRATTDAAFRAAGLAPTSVLEGPEMDAVLRFVERGLGVAVVPAMVLTDRPALSSARLSMPLTRTVSLAHRSDVTPGVAVAAMRDLIVATAVRFAERDPALSSILPETEETPS*