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SCNpilot_expt_1000_bf_scaffold_518_curated_18

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(15173..16162)

Top 3 Functional Annotations

Value Algorithm Source
Ribose transport system permease protein RbsC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUN7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 42.6
  • Coverage: 319.0
  • Bit_score: 248
  • Evalue 6.80e-63
Ribose transport system permease protein RbsC {ECO:0000313|EMBL:EYR77888.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.6
  • Coverage: 319.0
  • Bit_score: 248
  • Evalue 9.50e-63
rbsC; ribose/xylose/arabinose/galactoside ABC transporter permease; K10440 ribose transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 330.0
  • Bit_score: 246
  • Evalue 1.10e-62

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
ATGAACACCGCTCTCGCTCTACCCGATGCGCCGACCGCTCCGCGCCGGAGGAAGATCGATCCGACCCTCCTCGTGCTCCCCGCGGCTTTAGTGCTCATGATCGTCGTGTTCGCGGTACTGTCGACGACGTTCTTCACCGTCGACAACCTCTTCGTCATCCTCCGGCAGTCCGCTGTGCTGGGCGTCGCCGCCATCGGCGCCACAATGATCCTCATCGCCGGAAGGCTCGACATCAGCCAGGGCGCCGTCATCGCGGCATCCGGCATCGTCTGCGTGTCACTGATGCAGGCCGGTGTGCCCGCCGCCCTCGCCATGCTGGCAGCGGTGTCGCTGGGCGCACTGCTTGGCCTGGGCAACGGCCTGCTCACCGAAGGGCTGAAGATCCCCGGGTTCATCGCAACCCTTGCGACGGCACTCGTCATCCGAGGAGCGGCGCTGCTGTTCACCGGAGGACAGTCGATTGCCGCTCCCAGCACCGAAGGGTTCGACCTGCTCTCGTGGGTCGGCGTCGGCTCGATCGGCCCGATCCCCGTGAGCGTCCTCCTCGTTCTCATCGCCTACCTGGTGGCGTGGTTCGTCATGCGCAAGACGGCATGGGGAATGCGCACCTACGCGATCGGATCGTCGGCGCGCGCCTCACGCACGGCTGGGCTGCGCGTGCGCCGACAGGCCATCCAGATCTTCATCGTCGCCGGTGCCCTCTCGGCCGTGGCGGGTGTTCTTCTCGCGGGTCGGTTGGGCTCGGGAGCGCCGAGCAACGGCACAGGAGCGGAGTTCGACATCTTCGCTGCCGTCGTACTTGGGGGTACCTCGCTCTTCGGCGGTCGGGGAAGCGTGATGCGATCCCTGCTCGGCATCATCTTCCTCGCGGTGCTCAGCAACGGTCTGGTGATCCTGAACGTCTCGTCCTACGTGCAAGGGATCGCGACCGGAGTCGTGCTGATCATCGCCCTGGGAATCGACCGGTGGCGGGCACGTGACGATGACTGA
PROTEIN sequence
Length: 330
MNTALALPDAPTAPRRRKIDPTLLVLPAALVLMIVVFAVLSTTFFTVDNLFVILRQSAVLGVAAIGATMILIAGRLDISQGAVIAASGIVCVSLMQAGVPAALAMLAAVSLGALLGLGNGLLTEGLKIPGFIATLATALVIRGAALLFTGGQSIAAPSTEGFDLLSWVGVGSIGPIPVSVLLVLIAYLVAWFVMRKTAWGMRTYAIGSSARASRTAGLRVRRQAIQIFIVAGALSAVAGVLLAGRLGSGAPSNGTGAEFDIFAAVVLGGTSLFGGRGSVMRSLLGIIFLAVLSNGLVILNVSSYVQGIATGVVLIIALGIDRWRARDDD*