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SCNpilot_expt_1000_bf_scaffold_518_curated_32

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 30171..31436

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C6D8_BEUC1 similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 407.0
  • Bit_score: 556
  • Evalue 2.50e-155
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 407.0
  • Bit_score: 556
  • Evalue 8.00e-156
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10 similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 421.0
  • Bit_score: 638
  • Evalue 9.30e-180

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Taxonomy

BJP_08E140C01_10KDA_Microbacterium_68_10 → Microbacterium → Actinomycetales → Actinobacteridae → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGCTGCCGCGCGGCGGAGCCCCTGACGCCATGGCGGCGCTCACCCAGGTGCATCGCGAAGAGTGGGCGCGTATCGTGGCCGGCCTCACACGACGGTTCGGTGACCTCGATCTGGCCGAGGAGATGGCCGCGGACGCGTTCGCGGCCGCCGTCGAGCGCTGGCCGGACCACGGCATCCCGCCGAACCCGGCCGGGTGGGTCACCACCACCGCGAACCGCAGGGCGATCGACCGACTGCGGCGCGAGGCGCATCGGGAGGACAAGCATCGGGAGGCGATCGCGCTGCACGATCCGGAACCGTCCCGACCGATCGGCATCATCGAGGACGACCGGCTGCGTCTGCTGTTCATCTGCTGTCACCCTGCCCTGGCGCTGGACGCTCGAGTGGCTCTGACGCTGAGGATGGTCGGCGGGCTCACTGTCACCGAGATCGCCCGTGCCTTCCTCGTGCAGGACGCGACCATGGGGCAGCGAATCAGCCGGGCGAAGGCGAAGATCAAGTCCGCCGGCATCCCGTTCACCATCCCCGGGGCCGAGGACCTCCCGCACCGCATCGACGGCGTCCTCGCTGTGCTGTACCTCGTCTTCAACGAAGGGTACTTCGCCTCCGGACCCGACACGCCACCGATCCGGCGCGACCTCACAGCGGAGGCGATCCGCCTCACCCGCCTCACCTGCGCGCTTCTGCCCCAGGATGCGGAGGCCGAGGGGCTGCTCGCGCTGATGCTGCTCACCGAAGCCCGGTCCGCTGCACGCGTCTCAGCCGATGGTGAGCTCGTCCGCCTGGACGAGCAGGATCGTGGTTCCTGGGATCGGGCGCTGATCTCCGAAGGCCTCCACCTGATCGAGAAGGCCGAGAGGACGGCTGCCCGACCGGGCCGGTACGTGCTGCTCGCGGCGATCAACGCCGTCCATGACACAGCCCCGCACCCGCGCGACACCGACTGGGCACGCATCGTGACCCTCTACTCCCGCCTCGAGCAGATCGAGCCGAACCCGATCGTCACCCTGAACAAGGCGATCGCCATCTCCGAGCTCGACTCGCCGGACGTCGCGCTCGCGATCGTCGACCGGCTCGCCGACAGGCTCGACGGACTGCACGCCTTCCACGTCACCCGGGCGGAGCTGCTGCGTGCGGTCGGCCGGTCAGCCGATGCGCGGATCGCCTACGACCGTGCGATCGAGCTCGCTGAGAACTCTGCCGAGACCGCACACCTCATCCGCCGACGCAACCAACTCGTCACATCGAACGGAGCACGATCATGA
PROTEIN sequence
Length: 422
MLPRGGAPDAMAALTQVHREEWARIVAGLTRRFGDLDLAEEMAADAFAAAVERWPDHGIPPNPAGWVTTTANRRAIDRLRREAHREDKHREAIALHDPEPSRPIGIIEDDRLRLLFICCHPALALDARVALTLRMVGGLTVTEIARAFLVQDATMGQRISRAKAKIKSAGIPFTIPGAEDLPHRIDGVLAVLYLVFNEGYFASGPDTPPIRRDLTAEAIRLTRLTCALLPQDAEAEGLLALMLLTEARSAARVSADGELVRLDEQDRGSWDRALISEGLHLIEKAERTAARPGRYVLLAAINAVHDTAPHPRDTDWARIVTLYSRLEQIEPNPIVTLNKAIAISELDSPDVALAIVDRLADRLDGLHAFHVTRAELLRAVGRSADARIAYDRAIELAENSAETAHLIRRRNQLVTSNGARS*