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SCNpilot_expt_1000_bf_scaffold_518_curated_130

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(124002..124856)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X6Z0_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 281.0
  • Bit_score: 316
  • Evalue 2.30e-83
HTH-type transcriptional regulator CynR {ECO:0000313|EMBL:KJL33640.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 285.0
  • Bit_score: 397
  • Evalue 1.90e-107
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 281.0
  • Bit_score: 316
  • Evalue 7.20e-84

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGGAGATCCATCAGCTGCGCTACGCCGTCGCCGTCGCCGACACCGGCTCTTTCACCGCGGCCGCCGAGGCGGTCAAGGTCAGCCAGTCGGGCGTGAGCACGCAGGTGCAGAAGCTCGAGCGGGAGCTCGGCGTCGCGCTGTTCGATCGAAGCGGCCGCCGCGTGATCCTCACAGCCGACGGGGAGCGGATGCTGCCGGCGATCCGCGAGTCGCTCCGCGCCCTGAGCGAGATCCGCACGACCGCTGCGGACCTGCGCGGTCTGCTGCTGGGATCGCTGCGCGTCGGAACCGTGTCGGGGCTGACCTGGCCGCGGCTGTTCGACGCCCTCGGGGAGTTGCACGAAGCGCACCCGGGGCTGGAGGTACGGCTGCACGAGGACACCTCGGAGGGCCTCGTCTCCGCGCTGCGCCACGGCGAGCTGGACATCGCCGTGGTCGCCTGGGCGCAGCATCCGCCGGCAGCGCTTGAGACGATCACCCTCTTCGACGACCCGCTCGTCGCCGTGGTCGCGCGGGACCACCCCTGGGCGTCGCGGCGCAGCATCCGCCCCGCCGAGCTGGACATGGTCGACGTGATCTCCCTGCCGCTCGGCACCGGGGACCGCGCCGCCCTCGCACAGCTGCGACCCGGCCTGGAGCCGCGCTGGGAGGTGTCGACCCCGTGGTTCATCGAGCGGCTCGCCGCACGCGGCCTGGGAGTGGGCGTCGTCAGCGATGCCACGCGACGACGCTGGGACGAGGTCCGGGCCATTCCCGTGGACGCGCCCGATGTGCGCTCACGGCTCGGCATCGCCTGGCGTCCCTCGCCCTCACGCGCCGCGGAGGCGCTCCGCGCACTGCTCGTCGCGCCCTGA
PROTEIN sequence
Length: 285
MEIHQLRYAVAVADTGSFTAAAEAVKVSQSGVSTQVQKLERELGVALFDRSGRRVILTADGERMLPAIRESLRALSEIRTTAADLRGLLLGSLRVGTVSGLTWPRLFDALGELHEAHPGLEVRLHEDTSEGLVSALRHGELDIAVVAWAQHPPAALETITLFDDPLVAVVARDHPWASRRSIRPAELDMVDVISLPLGTGDRAALAQLRPGLEPRWEVSTPWFIERLAARGLGVGVVSDATRRRWDEVRAIPVDAPDVRSRLGIAWRPSPSRAAEALRALLVAP*