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SCNpilot_expt_1000_bf_scaffold_518_curated_138

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(130227..131096)

Top 3 Functional Annotations

Value Algorithm Source
spermidine synthase n=1 Tax=Microbacterium barkeri RepID=UPI0002F7F07F similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 289.0
  • Bit_score: 463
  • Evalue 1.50e-127
Contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92656.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 289.0
  • Bit_score: 473
  • Evalue 2.10e-130
spermidine synthase similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 287.0
  • Bit_score: 392
  • Evalue 1.40e-106

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Taxonomy

Microbacterium sp. MEJ108Y → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGGGACGAGCGCGCGGGAAGGATGCCGAGAACCCGCGTACGCGGCTGGATCACGGCGGCATCGCCGAGATCGCACCGAGCGAGTTCACCAGTGGCTTCGAGCTGATCGTGGACGGCACGCCGCAGTCGCACGTCGACCCGGCCGACCCCACGCACCTGCACTTCGAGTACATCGTGCGGATGGGCGCCGTGATCGATCAGCTCGGCTCCTCGGCATCCGCTCCGCTCAGCGTCGTGCACCTGGGCGCCGGTGCCCTGACGATCCCCCGCTACATCGACGCGACCCGGCCGGGATCGCGCCAGCAGGTGATCGAATGGGAGGCGCCGCTGGTGGCGCTGGTGCGCGAGCACCTTCCGCTGCCGCGTGGCGCAGCCATCCGCATCCGCATCGGCGATGCCCGCGAGGGGCTGAAGCGGCTCCCGCCCGCACTGCACGGACAGTGCGACCTGGTGGTGTCGGACGTCTTCTCCGGCGCGCAGACGCCCGCGCATCTGACCAGCGCCGAGTTCTACCGCGAGATCGCCGACCTGCTCGCGCCGGCGGGCGTGCTGCTCGTGAACGTCGCCGACGGCCCCGGCCTCGCCTTCGCCCGGCGGCAGGTCGCCACTGCGGCGACAGTGTTCCCCGAGGTGGCGCTGCTCGCCGACACGCAGGTGCTGAAGGGGCGGCGGTTCGGGAACCTCGTGCTCGCGGCATCCGCTCTTACGCTGCCCACCGACTGGCTGCCGCGGATGCTGGCGGCCGGGCCCCACCCGGCCAAGATCGCGCAGGGCGACGAGGTCGCTGCGTTCGCCCGCGGCGCGGCGATCGTGACGGATGCGGATGCCGTGGCCTCGCCGCGTCCGGACTCGAGCCTGTTCCTTCGCTGA
PROTEIN sequence
Length: 290
MGRARGKDAENPRTRLDHGGIAEIAPSEFTSGFELIVDGTPQSHVDPADPTHLHFEYIVRMGAVIDQLGSSASAPLSVVHLGAGALTIPRYIDATRPGSRQQVIEWEAPLVALVREHLPLPRGAAIRIRIGDAREGLKRLPPALHGQCDLVVSDVFSGAQTPAHLTSAEFYREIADLLAPAGVLLVNVADGPGLAFARRQVATAATVFPEVALLADTQVLKGRRFGNLVLAASALTLPTDWLPRMLAAGPHPAKIAQGDEVAAFARGAAIVTDADAVASPRPDSSLFLR*