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SCNpilot_expt_1000_bf_scaffold_518_curated_140

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 132585..135011

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.6
  • Coverage: 810.0
  • Bit_score: 1497
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 809.0
  • Bit_score: 1408
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Microbacterium barkeri RepID=UPI00030D6C83 similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 810.0
  • Bit_score: 1498
  • Evalue 0.0

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2427
TTGGCTGCTGCTCGCAACGCATCCACATCCACCACCAAGAAGAACGGCCGCGGAGTCTCCCGCCTCTCGTTCGCCAAGATCTCCGACACGCTGACGGTTCCCGATCTGCTCGCACTGCAGACGGAGTCGTTCGGCTGGCTCGTCGGGAACGACGACTGGAAGGCCCGGGTCGCAGAGGCCAAGAAGGCCGGCCGCAGCGACGTCCCCGAGGTGTCCGGACTCGGTGAGATCTTCGAGGAGATCTCCCCGATCGAGGACCTCGGCGAGACCATGCAGCTCTCGTTCACGAACCCCTACCTCGAGCCCGAGAAGTACTCGATCGAGGAGTGCAAGGAGCGCGGCAAGACCTACGCCGCCCCGCTGTACGTCGAGGCCGAGTTCATGAACCACCTCACGGGTGAGATCAAGACCCAGACGGTCTTCATGGGCGACTTCCCCCTGCAGACCGACAAGGGCACGTTCATCATCAACGGCTCCGAGCGCGTCGTCGTCTCGCAGCTCGTCCGCTCGCCGGGTGTCTACTTCGACAAGACCCCCGACAAGACCTCGGACAAGGACATCGTCACGGCTCGCGTCATCCCCAGCCGCGGCGCCTGGCTCGAGTTCGAGATCGACAAGCGCGACCAGGTGGGCGTGCGCGTCGACCGCAAGCGCAAGCAGTCGGTCACGGTCTTCCTGAAGGCCCTCGGCATGACCAGCGAGGAGATCCTCGCCGAGTTCGCCGGGTTCCCCTCCATCGAGGAGACTCTCGCGAAGGACACCATCCTCACCAAGGAGGACGCGCTCCGCGACATCTACCGCAAGCTCCGTCCGGGCGAGCAGGTCGCCGCCGAGGCCGCCCGCGCGCTGCTGGACAACTTCTACTTCAACCCGAAGCGCTACGACCTGGCCAAGGTGGGTCGCTACAAGATCAACCAGAAGCTGGGCCTGGCGGGTTCGCTCACCGACTCGGTGCTGACCGTCGAGGACATCGTCGCGACGATCAAGTACCTGGTGCGTCTGCACCGCGGCGACGAGTCCTTCGAGGGCATCCGCTCGGGCAAGAAGGCCGAGATCCGCATCGCGGTCGACGACATCGACAACTTCGGCAACCGTCGCATCCGCGCGGTGGGCGAGCTGATCCAGAACCAGGTGCGCACCGGTCTGTCCCGCATGGAGCGCGTCGTCCGCGAGCGCATGACCACTCAGGACATCGAGGCGATCACCCCGCAGACCCTGATCAACGTGCGTCCCGTCGTGGCCGCGATCAAGGAGTTCTTCGGCACCTCGCAGCTGTCGCAGTTCATGGACCAGAACAACCCGCTCGCGGGTCTGACCAACAAGCGCCGCCTCTCGGCCCTCGGCCCCGGTGGTCTGAGCCGCGACCGCGCCGGCGTCGAGGTCCGTGACGTCCACCCGTCGCACTACGGCCGCATGTGCCCGATCGAGACCCCTGAAGGCCCGAACATCGGCCTGATCGGTGCGCTCGCCACGTTCGCGCGCATCAACTCCTTCGGTTTCATCGAGACCCCGTACCGCAAGGTCGAGGACGGCCGGGTCACCGACCAGATCGACTACCTCACCGCTGCGGAGGAGGCCGACTTCAACATCGCCCAGGCGAACGCGCCCCTCACCAAGGACGGCCGCTTCACCGAGAGCCACGTGCTGGCCCGCCCCCGCGGCGGATCGGGTGAGGTCGACCTGTTCCTGCCCGAGGAGATCGGCTACATCGACGTCTCGCCGCGCCAGATGGTGTCGGTCGCGACCTCGCTGGTGCCGTTCCTCGAGCACGACGACGCGCAGCGCGCCCTCATGGGTGCCAACATGCAGCGTCAGGCCGTGCCGCTGCTCCGTTCCGACTCGCCGCTCGTCGGCACCGGTATGGAGGGCTACACCGCCATCGACGCCGGTGACGTCGTCACCGCGCTGAAGGCCGGTGTGGTCAGCGAGGTCTCCGCGGACCGCGTCGTGGTCATGCTCGACGAGGGCGGCACGCAGGAGTACCACCTGCGCAAGTTCGACCGCTCGAACCAGGGCACGTCCTACAACCAGCGCGTGATCGTCAACGCCGGTGAGCGCGTCGAGGTCGGCGAGGTCATCGCCGACGGTCCCGCCACCGACAACGGCGAGCTCGCGCTCGGCAAGAACCTGCTCGTCGCGTTCATGCCGTGGGAGGGTCACAACTTCGAGGACGCCATCATCCTGAGCCAGGAGCTGGTGAAGGAGGACACCCTCTCGTCGATCCACATCGAGGAGTACGAGGTCGACGCCCGCGATACCAAGCTGGGCAAGGAGGAGATCACTCGTGACCTCCCCAACGTCAGCCCCGAGCTGCTGAAGGACCTCGACGAGCGCGGCATCATCCGCATCGGCGCCGAGGTCCGCCCCGGCGACATCCTGGTCGGCAAGGTCACGCCGAAGGGCGAGACCGAGCTGTCGGCCGAGGAG
PROTEIN sequence
Length: 809
LAAARNASTSTTKKNGRGVSRLSFAKISDTLTVPDLLALQTESFGWLVGNDDWKARVAEAKKAGRSDVPEVSGLGEIFEEISPIEDLGETMQLSFTNPYLEPEKYSIEECKERGKTYAAPLYVEAEFMNHLTGEIKTQTVFMGDFPLQTDKGTFIINGSERVVVSQLVRSPGVYFDKTPDKTSDKDIVTARVIPSRGAWLEFEIDKRDQVGVRVDRKRKQSVTVFLKALGMTSEEILAEFAGFPSIEETLAKDTILTKEDALRDIYRKLRPGEQVAAEAARALLDNFYFNPKRYDLAKVGRYKINQKLGLAGSLTDSVLTVEDIVATIKYLVRLHRGDESFEGIRSGKKAEIRIAVDDIDNFGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPQTLINVRPVVAAIKEFFGTSQLSQFMDQNNPLAGLTNKRRLSALGPGGLSRDRAGVEVRDVHPSHYGRMCPIETPEGPNIGLIGALATFARINSFGFIETPYRKVEDGRVTDQIDYLTAAEEADFNIAQANAPLTKDGRFTESHVLARPRGGSGEVDLFLPEEIGYIDVSPRQMVSVATSLVPFLEHDDAQRALMGANMQRQAVPLLRSDSPLVGTGMEGYTAIDAGDVVTALKAGVVSEVSADRVVVMLDEGGTQEYHLRKFDRSNQGTSYNQRVIVNAGERVEVGEVIADGPATDNGELALGKNLLVAFMPWEGHNFEDAIILSQELVKEDTLSSIHIEEYEVDARDTKLGKEEITRDLPNVSPELLKDLDERGIIRIGAEVRPGDILVGKVTPKGETELSAEE