ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1484_curated_25

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 19799..21307

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B454F5 similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 501.0
  • Bit_score: 948
  • Evalue 2.10e-273
Uncharacterized protein {ECO:0000313|EMBL:CDJ99363.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 501.0
  • Bit_score: 899
  • Evalue 2.00e-258
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 493.0
  • Bit_score: 787
  • Evalue 1.90e-225

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. C448 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1509
GTGTGGCGGTTCTTCCGCGAGCACGGGCGCCAGGTGAAGAACGATCCCTACCGCATCCCCGGGATCGCCACCCGCACTGAGGTCACCAAGTCCGCCTCCGAGGGCGCGTTGCTGTGCCGGGCCGGGCACCTGCGGCCCTCGCTCGGCAAGCCAGCACCGGAGGATGTCGGCTACCGGATCGGCACCTCGCGTGGCAAGGGCGTGTGGGCGAGTGTGGAGGACAGCATCCTGCTGATCGGGCCGCCCCGCTCCGGCAAAGGCGCCCACATCGTCATCAACGCCATCCTCGACGCGCCCGGCGCGGTCGTCACCACCTCGACCCGGCCGGACAACCTCACCGCGACGCTCCGCGCCCGTGAGAGCGTCGGGCCGGTCGCGGTGTTCGACCCGCAGCACCTGGCCGAAGGCGTCCCCGCAGGCCTCAGGTGGTCACCCATCCGCGGGTGCGAGGACCCGCTGACCGCGATGATCCGCGCCACCGGCCTCGCCGCCGGCACCGGCCTGTCCGCTGGCGGCGTCGAAGGTGGCGGATTCTGGGAAGGCAAGACAAGAACCGCCCTCCAAGCCCTGCTCCACGCCGCCGCCCTCGACCGTCGCCCGCCCGGCGAGCTGTTCCGGTGGACCCTCGACCCGTCCGCCGCCGCGGACGCGGTGGCGATCCTGACGGCGAACCCGAACGCTGCGACGGGGTGGGCGGAGTCGTTGCAGACGATGATCGACTCCGACCCGAGAACCCGCGACTCCACCTGGCAAGGCGTCTCTCTCGCCCCCGCTGCCCTCGCGGACCCGCGCGTGCTCGATGCCGTATCGCCGCGCGAAGGCGAGGACTTCGACCCCGAAGCGTTCCTCCAAGCCCGCGGGACGCTCTGCCTTCTGGCGACCGGCGCTGGCGCGAACAACAGCGCGGCGCTGGTGGCGGCGTTCGTGGAAGACGTCGTGGAAGCCGCCCGCCGCATCGCCGCCCGCAGCCCCGGCGCGCGACTCGACCCGCCACTGCTGCTCGCCCTCGATGAGGTCGGCAACCTCGCCCCCTTGCCGTCGCTGCCGACGCTCATGGCGGAGGGCGGCGGCACCGGGATCACCACCATGCCGGTGTTGCAGTCGCTCGCGCAGGCGCGGGAGAAGTGGTCGGAGAACGCGGCCGGCGCGATCTGGGACGCGAGCATCGTCAAGATCATCCTCGGCGGCGCCTCGAACTCCAAAGACCTGCACGACCTGACCACGCTCATCGGCGAACGTGACGAGGTCACCGACTCCACCACGGTCGGAGACCACGGCTCCCGCTCCGCCCAACGCTCCATCCGCCGCGTGCCGATCATGCCGCCCGACGCGATCCGCACGCTCCCGTTCGGGACCGCGCTCATCATGCTCCGCTCCGCACCGCCCATCGTCACGAGAATGCGGACCTGGACCGACCGGCCCGACGCGAAAACGCTGCACGCCGACCGGGCAGGAATCGAAGCCCTGCTGCAACGCCGTCCGCCGGAGGAGCCAGGCGCACCTGCCTGA
PROTEIN sequence
Length: 503
VWRFFREHGRQVKNDPYRIPGIATRTEVTKSASEGALLCRAGHLRPSLGKPAPEDVGYRIGTSRGKGVWASVEDSILLIGPPRSGKGAHIVINAILDAPGAVVTTSTRPDNLTATLRARESVGPVAVFDPQHLAEGVPAGLRWSPIRGCEDPLTAMIRATGLAAGTGLSAGGVEGGGFWEGKTRTALQALLHAAALDRRPPGELFRWTLDPSAAADAVAILTANPNAATGWAESLQTMIDSDPRTRDSTWQGVSLAPAALADPRVLDAVSPREGEDFDPEAFLQARGTLCLLATGAGANNSAALVAAFVEDVVEAARRIAARSPGARLDPPLLLALDEVGNLAPLPSLPTLMAEGGGTGITTMPVLQSLAQAREKWSENAAGAIWDASIVKIILGGASNSKDLHDLTTLIGERDEVTDSTTVGDHGSRSAQRSIRRVPIMPPDAIRTLPFGTALIMLRSAPPIVTRMRTWTDRPDAKTLHADRAGIEALLQRRPPEEPGAPA*