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SCNpilot_expt_1000_bf_scaffold_1484_curated_31

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 27646..28161

Top 3 Functional Annotations

Value Algorithm Source
vsr; putative DNA mismatch endonuclease (EC:3.1.-.-); K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 130.0
  • Bit_score: 180
  • Evalue 4.80e-43
DNA mismatch repair protein Vsr n=1 Tax=Saccharopolyspora spinosa RepID=UPI0002378952 similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 135.0
  • Bit_score: 190
  • Evalue 1.90e-45
DNA mismatch endonuclease Vsr {ECO:0000313|EMBL:EID55141.1}; TaxID=882086 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 135.0
  • Bit_score: 188
  • Evalue 7.90e-45

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Taxonomy

Saccharomonospora xinjiangensis → Saccharomonospora → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGGAGACCATCGCGGACGACGCCCCGCTGCGCGTCCCCGCGGCGTCGAGCTCTGGGCGGCGCCGGAACATGCAGGCGAACCGTCGTCGGGACACGAAACCCGAGCTCGCGCTGCGTTCCGTCCTTCATCGAGCCGGGTTCCGCTACCGCGTGGACTACCGCATTGACCTCCCCGGCGGACGGGTACGCCCAGACATCGTGTTTACCCGCAAACGGATCGCCGTGTTCGTCGACGGGTGCTTCTGGCACTGCTGCCCTGAGCATGGCTCGCAGCCGTCAGTGAACCAGCCGTACTGGTCACCGAAGCTCGCGCGGAACGTGGAACGCGATGCACGGAACACGAAACTGCTGAGGGAAGCCGACTGGACTGTCCTGAGAATCTGGGAGCACGAGAGCGTATCCTCGGCGCTGAACCGCGTGACCGAAGCCTTGATGACATGTGCCGTTGGGAAGCGCGCAATGCAGAAGCCAAGACTGGCAACGGCCGTCGAGTCATGCAGCACTTCGTCGGACTGA
PROTEIN sequence
Length: 172
METIADDAPLRVPAASSSGRRRNMQANRRRDTKPELALRSVLHRAGFRYRVDYRIDLPGGRVRPDIVFTRKRIAVFVDGCFWHCCPEHGSQPSVNQPYWSPKLARNVERDARNTKLLREADWTVLRIWEHESVSSALNRVTEALMTCAVGKRAMQKPRLATAVESCSTSSD*