ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1484_curated_39

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(42971..43222)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI000373989F similarity UNIREF
DB: UNIREF100
  • Identity: 61.3
  • Coverage: 75.0
  • Bit_score: 98
  • Evalue 3.80e-18
Excisionase {ECO:0000313|EMBL:EYT56572.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 65.0
  • Bit_score: 89
  • Evalue 3.20e-15
phage transcriptional regulator AlpA similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 75.0
  • Bit_score: 84
  • Evalue 2.30e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Leucobacter sp. UCD-THU → Leucobacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 252
GTGAACGAAGAACAGCAGTCCAACTTCCACGGTCTAGAACCGCTCCTGAATATCAACGAACTCGCCGACTACCTCGGCATCCCCGTCTCGACCATCTACGACTGGCGCACCAACGGAAAGGGCCCTCGAGCCTACAGGTTCGGGAAGCGCATCAAGTTCGGCGTCGGCGACGTCCGCACTTGGATGGATACTATGCGCGAACCCGCCGGCGCCGCTACGTTTCCCGGCGGTGCGGGGAGCGCGCGTGGGTAG
PROTEIN sequence
Length: 84
VNEEQQSNFHGLEPLLNINELADYLGIPVSTIYDWRTNGKGPRAYRFGKRIKFGVGDVRTWMDTMREPAGAATFPGGAGSARG*