ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1484_curated_42

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(45017..47866)

Top 3 Functional Annotations

Value Algorithm Source
Putative conjugative relaxase n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6W624_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 950.0
  • Bit_score: 1383
  • Evalue 0.0
Putative conjugative relaxase {ECO:0000313|EMBL:GAB94630.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.3
  • Coverage: 950.0
  • Bit_score: 1383
  • Evalue 0.0
conjugative relaxase domain protein, TrwC/TraI family similarity KEGG
DB: KEGG
  • Identity: 71.5
  • Coverage: 947.0
  • Bit_score: 1360
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Kineosphaera limosa → Kineosphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2850
ATGACCGTCCTCGACGGCAAATGGCGCTCCCTCGACGGGCGCCCGATGCACGCCGCGACCGTCGCGCTGTCCGAGCTGCACGAGGCGGTGTTCGCCGATCACCTGACCCGGATGTTCGGGGTCTCGTGGGAGGCCCGCGACATGGGCAAGGACAGGAACCCCGCCTGGGCCATCACGACGGTTCCCGAGTCGCTGGTGTCGGAGTTCTCTTCACGGTCTCGGCATATCGAGGAGGAGAAGAACCGGCTCATCGCCGAATACGTTGCGGCGCATGGGCGGCAGCCGTCGAGCGCGACGATCCTGAGACTCCGCGCCCAAGCTACCCTCACCACCCGGCCCGAGAAGCAGGTCCGCTCCCTCGCCGACCTCACGAGCGAGTGGCGGCAGCGCGCCGGCCGGCTCCTCGACGCCGACGCGACCGCATGGGCAAGGTCGGTCACCGCGAACGACGCCCCGCTGCTCCTGCGCGCTGATGACGTGCCGTTGGAGGTGATCGCAAATCTCGGGCAGAGCGTTGTGGAGACGGTGGGTGAGAAGCGGTCGACGTGGCGGCGCTGGAACCTCACGTCCGAGGCCGCCCGGCAGACGATGGGCTACCGGTTCGCCAGCACGGAGGATCGGGAAGCCATCGTCGGGCTCGTCGTAGATGCCGCCGAAGCCGCTTCCCTGCGCCTCACCCCGCCCGAGCTCGCATCGAGTCCGGCGGTGTTCCAGCGCCCGGACGGAACGAGCGTGTTCCGTCCGAAGCACTCCGCCGCGTTCTCCTCCGAACTGCTCCTCGCGGCGGAAGACCGGCTCCTCGAGCGCGCCCGCACGATGACCGGCCCGACCGTTCCCCTCGCGACGGTCGAGAAGATCACCGCGAGGCCGGATCGGGAGGGGCGGATGCTCGGCCCGGATCAGGCCGACGCGCTCGCAAAAGTTGCCGTGTCGGGGCGCATCGTCGATGTCCTCGTCGGCCCTGCCGGGGCCGGAAAGACCACGGCGATGAACGGCCTGCGCCGTGCGTGGGAAGCAGAGCACGGCGCCGGTTCCGTGGTCGGGTTGGCGCCGTCGGCGGTGGCGGCGCAGGTTCTCGCCGATGACCTCGGCATCGCCACCGAGAACACGGCGAAGTGGTGGCAGAACCACATCATGTACGGCGAGACCTTCCAGGACGGGCAGCTCGTGATTCTGGATGAAGCCTCCCTCGCCGGCACCTTCTCTCTCGACCGCATCACCCGCCTCGCCGCCGAAGCCGGCGCGAAAGTTCTCCTGGTGGGCGACTTCGCGCAACTCCAATCGGTCGACGCTGGCGGGGCGTTCTCGCTCCTGGTTCATGATCGGAAGGATGCGCCGGAGCTGGTCGACGTGCACCGGTTCGTGAACCCGTGGGAGAAGGTCGCCTCCCTCGAACTTCGCCACGGGCACACGGAAGTCATCGACACCTATATCGAGCATGACCGTGTTCGAGGCGGTGAGACGGAGACGATGATCGACGCCGCCTACACAGCCTGGCGCGCCGACACGCAAGCTGGACGAGCAAGCGTGTTGGTGACGGACTCGAACGAAGCCGTCGCAGCCCTGAACAACCGTGCCCGCACCGATCTGATCCTGGACGGCACCGTGCATGGCAGCCGGGAGGCGGAGCTTCGAGACGGCGCCCGCGCCGCTATCGGGGATACCGTCATCACCCGCAGCAACGATCGCCGCCTCCGCACCGGCCGCTCCTGGGTCCGTAACGGCGACCGGTGGACGGTCACCGACGTTCGCGACGACGGCTCGATAGCGGTACGGCGGGTCGGGAAGAAGTGGGGCACCGTGATCCTGCCCGCCGAGTACGTCTCGGACGACCTGGACTTGGGATATGCCGTCACGTCTTTCCGGGCGCAGGGCATCACCGTTGACACCTCACATGTGCTGGTCGATCCGTCGATGACGCGCGAGAACCTGTACGTCGCCCTCACCAGAGGCCGGGAGTCGAACCGGGCGTATGTCGCCGTCGACAAGCCCGACGCCTCACACGAAGGCCCGCATCCCGGCGACAACACCGAAGCCACCGCCCGGAGCGTGTTGTCCGGTGTTCTGCAGCACGTCGGCGCGGAACTCTCCGCCCACGAAACCATCGAAGCCGAACACGAGGCATGGTCGAACATCGGCCAGCTCGCCGCCGAATACGAGACCATCGCCGCAGCCGTCCAACGCGACCGCTGGGCGAACCTCATCCGCGCCTCCGGGCTCAGCGATGACGATGCCGAAGCGGCCATCACCTCTGATGCCTTCGGCGCGCTCACCGCGGAGCTTCGCCGCGCGGAGGCGAACCATCACGACCTCGATACGCTCGTACCGCGCCTGGTCGCGGCCCGCGAATTCGATGACGCAGATGATGTCGCAGCGGTGCTCCACTACCGCGTCGCCCGCGCCACCGCCCGGCCCGCCGGGTCCGGTAGAACCCGCAAAGCACCCCGGCTCATCGCCGGCCTGATCCCAGAAGCGACCGGGGCGATGAGCACCGACATGCGGCAGGCCCTCGAAGAGCGCCGCGAGCTGATCGAACAACGCGCCACGGCCATCACCGAAACGGCACTCGCAGACCGCACGCCGTGGATCACGGCACTCGGGACGCAGCCCGAAGAGACCAGGTCAGCGGAAGCATGGCGGCGGCAGGTGCAGACGGTGGCCGCGTACCGGGATCGCTACGACATCACCACCGAACAGCCACTCGGAGCCCCGGCGGAGTCGGAGGCGCAGAAGATCGACGCCGCCCGAGCCCAAGCCGCCATCGACCGGGCGCAGGCTCTCGCGGCCCCGACCAGCCGAACACTGCGCCGCCGCCCACAGACCCCGGCCCGCCGAGGCCCGGCGCTCTGA
PROTEIN sequence
Length: 950
MTVLDGKWRSLDGRPMHAATVALSELHEAVFADHLTRMFGVSWEARDMGKDRNPAWAITTVPESLVSEFSSRSRHIEEEKNRLIAEYVAAHGRQPSSATILRLRAQATLTTRPEKQVRSLADLTSEWRQRAGRLLDADATAWARSVTANDAPLLLRADDVPLEVIANLGQSVVETVGEKRSTWRRWNLTSEAARQTMGYRFASTEDREAIVGLVVDAAEAASLRLTPPELASSPAVFQRPDGTSVFRPKHSAAFSSELLLAAEDRLLERARTMTGPTVPLATVEKITARPDREGRMLGPDQADALAKVAVSGRIVDVLVGPAGAGKTTAMNGLRRAWEAEHGAGSVVGLAPSAVAAQVLADDLGIATENTAKWWQNHIMYGETFQDGQLVILDEASLAGTFSLDRITRLAAEAGAKVLLVGDFAQLQSVDAGGAFSLLVHDRKDAPELVDVHRFVNPWEKVASLELRHGHTEVIDTYIEHDRVRGGETETMIDAAYTAWRADTQAGRASVLVTDSNEAVAALNNRARTDLILDGTVHGSREAELRDGARAAIGDTVITRSNDRRLRTGRSWVRNGDRWTVTDVRDDGSIAVRRVGKKWGTVILPAEYVSDDLDLGYAVTSFRAQGITVDTSHVLVDPSMTRENLYVALTRGRESNRAYVAVDKPDASHEGPHPGDNTEATARSVLSGVLQHVGAELSAHETIEAEHEAWSNIGQLAAEYETIAAAVQRDRWANLIRASGLSDDDAEAAITSDAFGALTAELRRAEANHHDLDTLVPRLVAAREFDDADDVAAVLHYRVARATARPAGSGRTRKAPRLIAGLIPEATGAMSTDMRQALEERRELIEQRATAITETALADRTPWITALGTQPEETRSAEAWRRQVQTVAAYRDRYDITTEQPLGAPAESEAQKIDAARAQAAIDRAQALAAPTSRTLRRRPQTPARRGPAL*