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SCNpilot_expt_1000_bf_scaffold_1197_curated_26

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 25889..27409

Top 3 Functional Annotations

Value Algorithm Source
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.8
  • Coverage: 511.0
  • Bit_score: 922
  • Evalue 3.00e-265
lysS; lysyl-tRNA synthetase (class II); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 506.0
  • Bit_score: 829
  • Evalue 4.50e-238
lysyl-tRNA synthetase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C9DFA similarity UNIREF
DB: UNIREF100
  • Identity: 90.8
  • Coverage: 511.0
  • Bit_score: 922
  • Evalue 2.10e-265

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Taxonomy

Microbacterium sp. UCD-TDU → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1521
ATGACTGACGCGTCTGCGCCGATCCCCTCGCCCGAGCTCGAAGAGGACGTCTTCGAGCAGAAGGCCGTGCGTCTCGCCAAGCGCGACAAGCTGATCGCGAACCGGGCGGATGCCGGTGGCGGCGCGTTCCCGGTCGGGGTGCCGGTGACGCACCTCATCCCCGCGCTGCGTGCGCAGTACGGCGACCTGGAGCCCGGCGCCGAGACCGGCGAGATCGTCGGCGTGGCCGGACGCGTGGTGTTCAGCCGCAACACCGGAAAGCTCTGCTTCGCGACCCTGCAGGCCGGTGACGGCTCGCGCATCCAGGCGATGGTGTCCCTCGCGAACGTCGGCGAGGAGTCGCTGGCGGAGTGGAAGGAGCTCGTCGACCTGGGCGACCACGTGTTCGTGCACGGCGAGGTGATCTCGAGCCGCCGCGGCGAGCTGTCGATCATGGCCGACGACTGGGCGATCGCGTCGAAGGCGATCCTGCCGCTGCCGAACGTGTATGCGGAGCTGAACGAGGAGACGCGCGTGCGCAGCCGCTTCCTCGACCTGATCGTGCGCGACCAGGCCCGCACCACCGTGCGCGCCCGCGCCGCCGTGAACGCCAGCCTGCGCGCCACGTTCACCAGCCACGACTACCTCGAGGTGGAGACGCCGATGCTGCAGGTGCAGCACGGCGGGGCATCCGCTCGTCCCTTTGTCACGCACTCCAACGCGTTCGACACCGAGCTGTACCTGCGCATCGCGCCGGAGCTGTATCTCAAGCGCGCCGTCGTCGGCGGCATCGAGCGGGTCTACGAGATCAACCGCAATTTCCGCAACGAGGGCGCCGACTCGACGCACTCGCCCGAGTTCGCGATGCTCGAGGCGTACCAGGCCTACGGCGACTACAACCAGATGGCCGAGCTGACTCAGGAGCTCGTGCAGAACGCGGCCATCGCGGTCGCCGGGTCCACCACGGTCACCTGGGCCGACGGCACCGAGTACGACCTGGGCGGCGAGTGGGACCGCATCTCGATGTACGACTCGCTGTCCGAGGTCTCCGGCCGCACGGTCACCCCGAAGGACTCCGTCGAGGACCTGATCGCCTTCGCGAACGAGAACGGCGTCGACATCCCGCCGCACGCCACGCACGGCAAGCTCGTCGAGGAGCTGTGGGAGCACTTCGTGAAGGGCGACCTGGTTCGCCCGACCTTCGTCATGGACTTCCCCGTCGACACCTCGCCGCTGGTGCGGGAGCACCGCTCGATCGCGGGCGTCGTGGAGAAGTGGGACCTGTACATCCGCGGGTTCGAGCTGGCCACCGGGTACTCCGAGCTGGTCGACCCGGTGATCCAGCGCGAGCGGTTCACCGAGCAGGCCAAGCTCGCCGCCCGCGGCGACGTCGAGGCCATGCCGATCGACGAGGAGTTCCTGCGCGCGCTCGAGCACGGCATGCCGCCGTCCGGTGGCATGGGCATGGGCATCGACCGCCTGCTGATGGCCGTCACGGGTCTCGGCATCCGCGAGACCATCCTCTTCCCGCTGGTGAAGTGA
PROTEIN sequence
Length: 507
MTDASAPIPSPELEEDVFEQKAVRLAKRDKLIANRADAGGGAFPVGVPVTHLIPALRAQYGDLEPGAETGEIVGVAGRVVFSRNTGKLCFATLQAGDGSRIQAMVSLANVGEESLAEWKELVDLGDHVFVHGEVISSRRGELSIMADDWAIASKAILPLPNVYAELNEETRVRSRFLDLIVRDQARTTVRARAAVNASLRATFTSHDYLEVETPMLQVQHGGASARPFVTHSNAFDTELYLRIAPELYLKRAVVGGIERVYEINRNFRNEGADSTHSPEFAMLEAYQAYGDYNQMAELTQELVQNAAIAVAGSTTVTWADGTEYDLGGEWDRISMYDSLSEVSGRTVTPKDSVEDLIAFANENGVDIPPHATHGKLVEELWEHFVKGDLVRPTFVMDFPVDTSPLVREHRSIAGVVEKWDLYIRGFELATGYSELVDPVIQRERFTEQAKLAARGDVEAMPIDEEFLRALEHGMPPSGGMGMGIDRLLMAVTGLGIRETILFPLVK*