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SCNpilot_expt_1000_bf_scaffold_1442_curated_30

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(33424..34092)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Agromyces subbeticus RepID=UPI0003B5F9E1 similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 215.0
  • Bit_score: 242
  • Evalue 5.60e-61
HTH-type transcriptional regulator TtgR {ECO:0000313|EMBL:KJL31653.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 229.0
  • Bit_score: 327
  • Evalue 1.40e-86
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 218.0
  • Bit_score: 190
  • Evalue 7.90e-46

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGTTCAGTTCTGAGCTCACGCCGAAGGCCGAGCAGACACGCGCCCGCATCCGCGCAGCCGCGATCGATTCCTTCATCGAGCGCGGCTACCCCGACACCACGATCCGGCTGATCGCCAAGGAGGCGGGGGTGTCGGTGGGGAACGCGTACTACTACTTCCCCTCGAAGACCCACCTCGTGCAGGAGCTGTACGAGCAGGTGCAGCAGGACCACGCTCGCGTCGCAGTCCCCCTGCTGGAGGGCGTCGGGGGCCTGGTCGACCGCCTGCGGATCGTCTGCGAGACGGGCCTCGAGACGCTGGAGCCCTATCAGCGCGTGGCGCCGGGCTTCCTCAGCGCCATGATCGCCCCGGACTCCCCCATCAACCCGCTGTCCCGCGAGTCGTCCGGTGCGCGGGAGATGACGATCGGCCTCTTCCGGCGCGCGGTCGACGGCGCCGAGCACCGTCTGCCGGATGACATCGCGAAACGGCTCCCGGATGCCCTCTTCGTCGCGTTCCTGGGACTCATCGTGCGCTGGACCTACGACGAGGACGACCACGCCCGCACCCGGCGCCTTCTGGACACCGCACTGAAGCTGCTCGCGGTGGCCCTTCCCTTCGTGCGGGTCCCGGGCGTGCGCGGAGTCGCACGCGACCTGCTCGACCAGATCGCGGAGGTGCGGGCATGA
PROTEIN sequence
Length: 223
MFSSELTPKAEQTRARIRAAAIDSFIERGYPDTTIRLIAKEAGVSVGNAYYYFPSKTHLVQELYEQVQQDHARVAVPLLEGVGGLVDRLRIVCETGLETLEPYQRVAPGFLSAMIAPDSPINPLSRESSGAREMTIGLFRRAVDGAEHRLPDDIAKRLPDALFVAFLGLIVRWTYDEDDHARTRRLLDTALKLLAVALPFVRVPGVRGVARDLLDQIAEVRA*