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scnpilot_p_inoc_scaffold_1899_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1899_curated_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3..818
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5Z6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07593.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1899_curated_2
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(954..1793)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5Z5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07592.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1899_curated_3
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1835..2584
DNA (750bp) protein (250aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbac
gpmA; phosphoglycerate mutase 1; K01834 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.1]
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5Z4_9MICO
scnpilot_p_inoc_scaffold_1899_curated_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2673..3374)
DNA (702bp) protein (234aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5Z3_9MICO
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
phoU; phosphate uptake regulator; K02039 phosphate transport system protein
scnpilot_p_inoc_scaffold_1899_curated_5
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3469..4743
DNA (1275bp) protein (425aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
signal transduction histidine kinase; K07768 two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
ATP-binding region ATPase domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5Z2_9MICO
scnpilot_p_inoc_scaffold_1899_curated_6
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4740..5423
DNA (684bp) protein (228aa)
Response regulator receiver n=2 Tax=Microbacterium RepID=H8E5Z1_9MICO
XRE family transcriptional regulator {ECO:0000313|EMBL:EXJ52347.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K07776 two-component system, OmpR family, response regulator RegX3
scnpilot_p_inoc_scaffold_1899_curated_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5500..5967)
DNA (468bp) protein (156aa)
DNA modification methylase n=2 Tax=Microbacterium RepID=H8E5Z0_9MICO
DNA modification methylase {ECO:0000313|EMBL:EIC07587.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
DNA modification methylase
scnpilot_p_inoc_scaffold_1899_curated_8
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6113..6595
DNA (483bp) protein (161aa)
Transcription factor CarD n=2 Tax=Microbacterium RepID=H8E5Y9_9MICO
CarD family transcriptional regulator {ECO:0000313|EMBL:EPD85094.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
CarD family transcriptional regulator; K07736 CarD family transcriptional regulator
scnpilot_p_inoc_scaffold_1899_curated_9
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6645..7832
DNA (1188bp) protein (396aa)
ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; K12506 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
Bifunctional enzyme IspD/IspF n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AEI7_9MICO
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_1899_curated_10
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7886..9289
DNA (1404bp) protein (468aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
cysS; cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16]
Cysteine--tRNA ligase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E5Y6_9MICO
scnpilot_p_inoc_scaffold_1899_curated_11
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9282..10274
DNA (993bp) protein (331aa)
rRNA methylase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7H3_9MICO
RNA methyltransferase {ECO:0000313|EMBL:EXJ52351.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_1899_curated_12
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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10317..10955
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B908_9MICO
NAD-dependent epimerase {ECO:0000313|EMBL:KIC60056.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
NADH-flavin reductase; K07118
scnpilot_p_inoc_scaffold_1899_curated_13
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(10974..12281)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E5Y3_9MICO
Lipopolysaccharide kinase {ECO:0000313|EMBL:EXJ52353.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1899_curated_14
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12366..13466)
DNA (1101bp) protein (367aa)
ABC transporter related protein n=2 Tax=Microbacterium RepID=H8E5Y2_9MICO
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC60058.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
sugar ABC transporter ATPase; K10243 cellobiose transport system ATP-binding protein
scnpilot_p_inoc_scaffold_1899_curated_15
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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13736..14680
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ASJ1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85102.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
protein-disulfide isomerase
scnpilot_p_inoc_scaffold_1899_curated_16
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(14758..15318)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A7H9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85103.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
scnpilot_p_inoc_scaffold_1899_curated_17
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(15549..15809)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B915_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85104.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Displaying 17 items

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