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scnpilot_p_inoc_scaffold_1103_curated

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1103_curated_1
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..568)
DNA (567bp) protein (189aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
gyrB; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B n=2 Tax=Microbacterium RepID=H8E9B9_9MICO
scnpilot_p_inoc_scaffold_1103_curated_2
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(692..1177)
DNA (486bp) protein (162aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E9B8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06512.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives
scnpilot_p_inoc_scaffold_1103_curated_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1170..2378)
DNA (1209bp) protein (403aa)
DNA replication and repair protein RecF n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9B7_9MICO
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
recF; recombinational DNA repair ATPase; K03629 DNA replication and repair protein RecF
scnpilot_p_inoc_scaffold_1103_curated_4
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2440..3582)
DNA (1143bp) protein (381aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
dnaN; DNA polymerase sliding clamp subunit; K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
DNA polymerase III subunit beta n=2 Tax=Microbacterium RepID=H8E9B6_9MICO
scnpilot_p_inoc_scaffold_1103_curated_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4049..5467)
DNA (1419bp) protein (473aa)
Chromosomal replication initiator protein DnaA n=2 Tax=Microbacterium RepID=H8E9B5_9MICO
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
dnaA; ATPase; K02313 chromosomal replication initiator protein
scnpilot_p_inoc_scaffold_1103_curated_6
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


5795..5932
DNA (138bp) protein (46aa)
50S ribosomal protein L34 n=2 Tax=Microbacterium RepID=H8E9B4_9MICO
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
rpmH; ribosomal protein L34; K02914 large subunit ribosomal protein L34
scnpilot_p_inoc_scaffold_1103_curated_7
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5943..6281
DNA (339bp) protein (113aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
RNase P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5]
Ribonuclease P protein component n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9B3_9MICO
scnpilot_p_inoc_scaffold_1103_curated_8
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6254..6664
DNA (411bp) protein (137aa)
Putative membrane protein insertion efficiency factor n=2 Tax=Microbacterium RepID=H8E9B2_9MICO
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein; K08998 hypothetical protein
scnpilot_p_inoc_scaffold_1103_curated_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6668..7795
DNA (1128bp) protein (376aa)
Membrane protein insertase, YidC/Oxa1 family n=2 Tax=Microbacterium RepID=H8E9B1_9MICO
Membrane protein insertase, YidC/Oxa1 family {ECO:0000313|EMBL:EIC06505.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
preprotein translocase subunit YidC; K03217 preprotein translocase subunit YidC
scnpilot_p_inoc_scaffold_1103_curated_10
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7824..8330
DNA (507bp) protein (169aa)
Single-stranded nucleic acid binding R3H domain-containing protein n=2 Tax=Microbacterium RepID=H8E9B0_9MICO
DNA-binding protein {ECO:0000313|EMBL:EXJ51400.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
RNA-binding protein; K06346 spoIIIJ-associated protein
scnpilot_p_inoc_scaffold_1103_curated_11
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8336..8989
DNA (654bp) protein (218aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
gidB; S-adenosylmethionine-dependent methyltransferase; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
Ribosomal RNA small subunit methyltransferase G n=2 Tax=Microbacterium RepID=H8E9A9_9MICO
scnpilot_p_inoc_scaffold_1103_curated_12
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9994..10929
DNA (936bp) protein (312aa)
Chromosome partitioning protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AGG7_9MICO
Chromosome partitioning protein {ECO:0000313|EMBL:EPD85860.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
parA; ATPase; K03496 chromosome partitioning protein
scnpilot_p_inoc_scaffold_1103_curated_13
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10929..11960
DNA (1032bp) protein (344aa)
ParB family chromosome partitioning protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABT9_9MICO
Chromosome partitioning protein ParB {ECO:0000313|EMBL:EXJ51403.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
parB; transcriptional regulator; K03497 chromosome partitioning protein, ParB family
scnpilot_p_inoc_scaffold_1103_curated_14
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11970..12311
DNA (342bp) protein (114aa)
Tryptophan synthase alpha chain n=2 Tax=Microbacterium RepID=H8E9A6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51404.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
tryptophan synthase alpha chain
scnpilot_p_inoc_scaffold_1103_curated_15
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12370..12693)
DNA (324bp) protein (108aa)
Thioredoxin n=2 Tax=Microbacterium RepID=H8E9A5_9MICO
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
trxA; thiol-disulfide isomerase and thioredoxins; K03671 thioredoxin 1
scnpilot_p_inoc_scaffold_1103_curated_16
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12792..13772)
DNA (981bp) protein (327aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
trxB; thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9A4_9MICO
scnpilot_p_inoc_scaffold_1103_curated_17
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13856..15466)
DNA (1611bp) protein (537aa)
Integral membrane protein MviN n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9A3_9MICO
Integral membrane protein MviN {ECO:0000313|EMBL:KIC57956.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein, virulence factor; K03980 virulence factor
scnpilot_p_inoc_scaffold_1103_curated_18
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15459..17579)
DNA (2121bp) protein (707aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9A2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51435.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component
scnpilot_p_inoc_scaffold_1103_curated_19
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17841..19388
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AUS9_9MICO
SAM-dependent methyltransferase {ECO:0000313|EMBL:EXJ51408.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
methylase of polypeptide chain release factors
scnpilot_p_inoc_scaffold_1103_curated_20
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19428..20867
DNA (1440bp) protein (480aa)
pcnB; tRNA nucleotidyltransferase/poly(A) polymerase; K00970 poly(A) polymerase [EC:2.7.7.19]
CCA tRNA nucleotidyltransferase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A9M5_9MICO
RNA nucleotidyltransferase {ECO:0000313|EMBL:EXJ51409.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_1103_curated_21
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21006..22334
DNA (1329bp) protein (443aa)
GAF domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E999_9MICO
Transcriptional regulator {ECO:0000313|EMBL:EXJ51410.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transcriptional activator of acetoin/glycerol metabolism
scnpilot_p_inoc_scaffold_1103_curated_22
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22486..24624
DNA (2139bp) protein (713aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
4-alpha-glucanotransferase (EC:2.4.1.25); K00705 4-alpha-glucanotransferase [EC:2.4.1.25]
4-alpha-glucanotransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E998_9MICO
scnpilot_p_inoc_scaffold_1103_curated_23
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24596..25003)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E997_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06491.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein; K15269 probable blue pigment (indigoidine) exporter
scnpilot_p_inoc_scaffold_1103_curated_24
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25023..25178
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AUT3_9MICO
Regulatory protein MarR {ECO:0000313|EMBL:EIC06490.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_1103_curated_25
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25416..26963
DNA (1548bp) protein (516aa)
NAD-dependent aldehyde dehydrogenase; K00128 aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
Aldehyde Dehydrogenase n=2 Tax=Microbacterium RepID=H8E995_9MICO
Aldehyde dehydrogenase {ECO:0000313|EMBL:EXJ51413.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_1103_curated_26
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27056..27439
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E994_9MICO
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KIC57948.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein; K09959 hypothetical protein
Displaying 26 items

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