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scnpilot_p_inoc_scaffold_1329_curated

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1329_curated_1
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2..1291
DNA (1290bp) protein (430aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
gyrB; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; K02470 DNA gyrase subunit B [EC:5.99.1.3]
DNA gyrase subunit B n=2 Tax=Microbacterium RepID=H8E9B9_9MICO
scnpilot_p_inoc_scaffold_1329_curated_2
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1346..3922
DNA (2577bp) protein (859aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
gyrA; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; K02469 DNA gyrase subunit A [EC:5.99.1.3]
DNA gyrase subunit A n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AUR0_9MICO
scnpilot_p_inoc_scaffold_1329_curated_3
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3919..4320
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E9C1_9MICO
Membrane protein {ECO:0000313|EMBL:EXJ51389.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1329_curated_4
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4688..4978
DNA (291bp) protein (97aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NFD8_MICTS
Uncharacterized protein {ECO:0000313|EMBL:EXJ51388.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1329_curated_5
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4993..5838)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BB62_9MICO
Transcriptional regulator {ECO:0000313|EMBL:KIC57972.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
putative DNA-binding protein
scnpilot_p_inoc_scaffold_1329_curated_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5915..7813
DNA (1899bp) protein (633aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
Dihydroxy-acid dehydratase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9C4_9MICO
scnpilot_p_inoc_scaffold_1329_curated_7
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7977..8414
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AUQ4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85842.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
ADP-ribose pyrophosphatase
scnpilot_p_inoc_scaffold_1329_curated_8
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(8433..8912)
DNA (480bp) protein (160aa)
YbaK/prolyl-tRNA synthetase associated region n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9C6_9MICO
YbaK/prolyl-tRNA synthetase associated region {ECO:0000313|EMBL:EIC06520.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1329_curated_9
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8979..9548)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AGE6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85840.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
superfamily II DNA/RNA helicase, SNF2 family
scnpilot_p_inoc_scaffold_1329_curated_10
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9631..10197
DNA (567bp) protein (189aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; K03767 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Microbacterium RepID=H8E9C8_9MICO
scnpilot_p_inoc_scaffold_1329_curated_11
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10218..11063
DNA (846bp) protein (282aa)
Rhomboid family protein n=2 Tax=Microbacterium RepID=H8E9C9_9MICO
Protease {ECO:0000313|EMBL:EXJ52092.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1329_curated_12
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11170..11409)
DNA (240bp) protein (80aa)
Cell division protein CrgA n=2 Tax=Microbacterium RepID=H8E9D0_9MICO
Cell division protein CrgA {ECO:0000256|HAMAP-Rule:MF_00631}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1329_curated_13
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11621..12388
DNA (768bp) protein (256aa)
sortase; K07284 sortase A [EC:3.4.22.70]
Peptidase C60 sortase A and B n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9D1_9MICO
Peptidase C60 sortase A and B {ECO:0000313|EMBL:EIC06525.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_1329_curated_14
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12388..12546
DNA (159bp) protein (53aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E946_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06526.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1329_curated_15
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12527..13237
DNA (711bp) protein (237aa)
glutamine amidotransferase of anthranilate synthase; K01664 para-aminobenzoate synthetase component II [EC:2.6.1.85]
Glutamine amidotransferase of anthranilate synthase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E947_9MICO
Glutamine amidotransferase of anthranilate synthase {ECO:0000313|EMBL:EIC06527.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_1329_curated_16
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13172..14875)
DNA (1704bp) protein (568aa)
serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
Serine/threonine protein kinase-related protein n=2 Tax=Microbacterium RepID=H8E948_9MICO
Serine/threonine protein kinase-related protein {ECO:0000313|EMBL:EIC06528.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_1329_curated_17
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14980..16713)
DNA (1734bp) protein (578aa)
pknA; serine/threonine protein kinase; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1]
Serine/threonine protein kinase-related protein n=2 Tax=Microbacterium RepID=H8E949_9MICO
Serine/threonine protein kinase-related protein {ECO:0000313|EMBL:EIC06529.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_1329_curated_18
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16710..18170)
DNA (1461bp) protein (487aa)
cell division protein FtsI/penicillin-binding protein 2; K05364 peptidoglycan glycosyltransferase [EC:2.4.1.129]
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AGD6_9MICO
Cell division protein FtsI {ECO:0000313|EMBL:KIC57984.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
scnpilot_p_inoc_scaffold_1329_curated_19
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18167..19558)
DNA (1392bp) protein (464aa)
Cell cycle protein n=2 Tax=Microbacterium RepID=H8E951_9MICO
Cell division protein {ECO:0000313|EMBL:EXJ52100.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
ftsW; bacterial cell division membrane protein
scnpilot_p_inoc_scaffold_1329_curated_20
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19555..20793)
DNA (1239bp) protein (413aa)
serine/threonine protein phosphatase; K01090 protein phosphatase [EC:3.1.3.16]
Protein phosphatase 2C-like protein n=2 Tax=Microbacterium RepID=H8E952_9MICO
Protein phosphatase 2C-like protein {ECO:0000313|EMBL:EIC06532.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_1329_curated_21
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20804..21355)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AUP2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD85827.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
FHA domain
scnpilot_p_inoc_scaffold_1329_curated_22
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21352..22083)
DNA (732bp) protein (244aa)
Forkhead-associated protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E954_9MICO
Forkhead-associated protein {ECO:0000313|EMBL:EIC06534.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
FHA domain
scnpilot_p_inoc_scaffold_1329_curated_23
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22459..22725)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AGD2_9MICO
GntR family transcriptional regulator {ECO:0000313|EMBL:EXJ52104.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_1329_curated_24
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23135..23251)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E956_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06536.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_1329_curated_25
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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23782..24828
DNA (1047bp) protein (349aa)
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase GumD {ECO:0000313|EMBL:EYR81350.1}; EC=2.7.8.31 {ECO:0000313|EMBL:EYR81350.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (EC:2.7.8.6)
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase GumD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CEV8_9RHIZ
Displaying 25 items

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